RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PICALMQ13492 652 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 IYDQ6PHW0 289 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 TBC1D21Q8IYX1 336 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 RNF169Q8NCN4 708 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 DDX50Q9BQ39 737 aaKnown RBP9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 GMIPQ9P107 970 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 AP1M2Q9Y6Q5 423 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 ZMYM4Q5VZL5 1548 aa9.57□□□□□ -0.88
CTDSPL-201ENST00000273179 PALM3A6NDB9 673 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 HLA-DRAP01903 254 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 GDI1P31150 447 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 UGP2Q16851 508 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SPDYCQ5MJ68 293 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 RAPH1Q70E73 1250 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ENAHQ8N8S7 591 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 MTRRQ9UBK8 725 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 HPCAL4Q9UM19 191 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ELP1O95163 1332 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 LGR5O75473 907 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 OR5F1O95221 314 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 MX2P20592 715 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 MDH1BQ5I0G3 518 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PPP1R42Q7Z4L9 355 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 DQX1Q8TE96 717 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 GAL3ST1Q99999 423 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ARNT2Q9HBZ2 717 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PDE11AQ9HCR9 933 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SQORQ9Y6N5 450 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PPLO60437 1756 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 WDR91A4D1P6 747 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 LMNAP02545 664 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FYNP06241 537 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 AARSP49588 968 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 IFIT5Q13325 482 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 BZW1Q7L1Q6 419 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FAM71BQ8TC56 605 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ANKRD36BP1Q96IX9 119 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 TDRD1Q9BXT4 1180 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ACTR5Q9H9F9 607 aaPredicted RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SCPEP1Q9HB40 452 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SLC39A2Q9NP94 309 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PTBP2Q9UKA9 531 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SCAF8Q9UPN6 1271 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 EFR3BQ9Y2G0 817 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ARHGAP10A1A4S6 786 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ALOX5P09917 674 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PSMA3P25788 255 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PRKAR1BP31321 381 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 ETFBP38117 255 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 STAT3P40763 770 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 USP46P62068 366 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 MINDY4Q4G0A6 757 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PCNX4Q63HM2 1172 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 HDAC2Q92769 488 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 NMD3Q96D46 503 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 C1orf74Q96LT6 269 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 AIFM2Q9BRQ8 373 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 TTPALQ9BTX7 342 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 GID8Q9NWU2 228 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 AIPL1Q9NZN9 384 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 SAMM50Q9Y512 469 aa9.56□□□□□ -0.88
CTDSPL-201ENST00000273179 PTPRCP08575 1304 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 ITIH6Q6UXX5 1313 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 IFT172Q9UG01 1749 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 GLI2P10070 1586 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 F5H423 210 aaPredicted RBP9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 VWA5AO00534 786 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 N4BP3O15049 544 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 KCNA6P17658 529 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 HAAOP46952 286 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 SEPHS1P49903 392 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 ATP11AP98196 1134 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 KRT76Q01546 638 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 PLD1Q13393 1074 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 CCDC6Q16204 474 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 GPR162Q16538 588 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 C10orf53Q8N6V4 93 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 STMN4Q9H169 189 aaPredicted RBP9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 VPS11Q9H270 941 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 FAM204AQ9H8W3 233 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 RPRD1BQ9NQG5 326 aaKnown RBP9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 CIDEBQ9UHD4 219 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 ARHGEF37A1IGU5 675 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 FGAP02671 866 aa9.55□□□□□ -0.88
CTDSPL-201ENST00000273179 CYP2E1P05181 493 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms