RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 CCDC174Q6PII3 467 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 NOX5Q96PH1 765 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 WDR18Q9BV38 432 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 CEP72Q9P209 647 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 CIITAP33076 1130 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 COPB2P35606 906 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 CCT5P48643 541 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 MARSP56192 900 aaKnown RBP20.88■□□□□ 0.93
CPNE7-201ENST00000268720 NAA35Q5VZE5 725 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 RDH13Q8NBN7 331 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 FAM20AQ96MK3 541 aa20.88■□□□□ 0.93
CPNE7-201ENST00000268720 HEXIM1O94992 359 aaKnown RBP20.87■□□□□ 0.93
CPNE7-201ENST00000268720 IRAK1P51617 712 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
CPNE7-201ENST00000268720 SLC9C1Q4G0N8 1177 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 OR2W6PQ8NHA6 318 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 ERMNQ8TAM6 284 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 EIF2AK1Q9BQI3 630 aaKnown RBP20.87■□□□□ 0.93
CPNE7-201ENST00000268720 SPDYE2BA6NHP3 402 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 LRRN2O75325 713 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 SPDYE6P0CI01 402 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 HOXA7P31268 230 aaPredicted RBP20.87■□□□□ 0.93
CPNE7-201ENST00000268720 TTMPQ5BVD1 217 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 MIGA2Q7L4E1 593 aa20.87■□□□□ 0.93
CPNE7-201ENST00000268720 KCNK3O14649 394 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 CETN3O15182 167 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 PDCLQ13371 301 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 LLGL1Q15334 1064 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 ZNF571Q7Z3V5 609 aaPredicted RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 ZC3H3Q8IXZ2 948 aaKnown RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 CCDC43Q96MW1 224 aaKnown RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 STIM2Q9P246 746 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 AKAP3O75969 853 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 TCP1P17987 556 aaKnown RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 PAFAH1B1P43034 410 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 KNOP1Q1ED39 458 aaKnown RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 RBM46Q8TBY0 533 aaKnown RBP20.86■□□□□ 0.93
CPNE7-201ENST00000268720 FAM107BQ9H098 131 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 HDAC9Q9UKV0 1011 aa20.86■□□□□ 0.93
CPNE7-201ENST00000268720 ZEB2O60315 1214 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 GNA14O95837 355 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 EDRF1Q3B7T1 1238 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 EPM2AIP1Q7L775 607 aaPredicted RBP20.85■□□□□ 0.93
CPNE7-201ENST00000268720 PACS2Q86VP3 889 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 GLIS2Q9BZE0 524 aaPredicted RBP20.85■□□□□ 0.93
CPNE7-201ENST00000268720 EDEM3Q9BZQ6 932 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 SSU72P8A0A1W2PR75 194 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 BACH1O14867 736 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 NMT1P30419 496 aaKnown RBP20.85■□□□□ 0.93
CPNE7-201ENST00000268720 GNGT1P63211 74 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 ZIM3Q96PE6 472 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 SPAG5Q96R06 1193 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 FBXO28Q9NVF7 368 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
CPNE7-201ENST00000268720 GRID2IPA4D2P6 1211 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 DDX39AO00148 427 aaKnown RBP20.84■□□□□ 0.93
CPNE7-201ENST00000268720 PIK3CDO00329 1044 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 GCNT3O95395 438 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 ZNF70Q9UC06 446 aaPredicted RBP20.84■□□□□ 0.93
CPNE7-201ENST00000268720 HERC5Q9UII4 1024 aaKnown RBP20.84■□□□□ 0.93
CPNE7-201ENST00000268720 TRAF3IP3Q9Y228 551 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 CYP3A4P08684 503 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 CORO7P57737 925 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 OTOP1Q7RTM1 612 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 TPH2Q8IWU9 490 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 CAPS2Q9BXY5 557 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 TRIM31Q9BZY9 425 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 TMEM39BQ9GZU3 492 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 GANQ9H2C0 597 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 VEZTQ9HBM0 779 aa20.84■□□□□ 0.93
CPNE7-201ENST00000268720 PJA2O43164 708 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 SLITRK3O94933 977 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 MAGEA9P43362 315 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 HSD17B14Q9BPX1 270 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 CNTNAP1P78357 1384 aa20.83■□□□□ 0.93
CPNE7-201ENST00000268720 SERPING1P05155 500 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 PRLRP16471 622 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ABCB4P21439 1286 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ASIC2Q16515 512 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 MCTP2Q6DN12 878 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 RINT1Q6NUQ1 792 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 DPY19L2P1Q6NXN4 242 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 PPP4R3CPQ6ZMV5 832 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ARHGEF10LQ9HCE6 1279 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 LRRC4CQ9HCJ2 640 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ZNF277Q9NRM2 450 aaPredicted RBP20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ARMCX3Q9UH62 379 aaPredicted RBP20.83■□□□□ 0.92
CPNE7-201ENST00000268720 ASTN1O14525 1302 aa20.83■□□□□ 0.92
CPNE7-201ENST00000268720 RAD51CO43502 376 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 SLC26A4O43511 780 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 ITGA4P13612 1032 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 RSBN1LQ6PCB5 846 aaPredicted RBP20.82■□□□□ 0.92
CPNE7-201ENST00000268720 ZNF572Q7Z3I7 529 aaPredicted RBP20.82■□□□□ 0.92
CPNE7-201ENST00000268720 BCAS4Q8TDM0 211 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 CASKIN2Q8WXE0 1202 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 DYDC2Q96IM9 177 aa20.82■□□□□ 0.92
CPNE7-201ENST00000268720 SEPT11Q9NVA2 429 aaKnown RBP20.82■□□□□ 0.92
CPNE7-201ENST00000268720 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms