RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PDE4DQ08499 809 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 STK4Q13043 487 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TTI2Q6NXR4 508 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 RETREG2Q8NC44 543 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MYH10P35580 1976 aa17.45■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PNMA6FA0A0J9YX94 578 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L15C9J2P7 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L13C9JLJ4 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L11C9JVI0 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L18D6R9N7 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L22D6RA61 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L17D6RBQ6 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L19D6RCP7 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L20D6RJB6 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 HEXIM1O94992 359 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DNA2P51530 1060 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L24Q0WX57 530 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GPR162Q16538 588 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 C9orf131Q5VYM1 1079 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USP17L6PQ6QN14 398 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ZBED3Q96IU2 234 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CALR3Q96L12 384 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ATP6V1G3Q96LB4 118 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DUSP9Q99956 384 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TRIM9Q9C026 710 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KIF11P52732 1056 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TRADDQ15628 312 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ZKSCAN8Q15776 578 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 C6orf89Q6UWU4 347 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 NOC4LQ9BVI4 516 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GDF3Q9NR23 364 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PSME4Q14997 1843 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 F5H6K3 240 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DNM1LO00429 736 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 BUB1O43683 1085 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SLC1A4P43007 532 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MTIF2P46199 727 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KLRC3Q07444 240 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CCDC121Q6ZUS5 278 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CYFIP2Q96F07 1278 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CNOT6LQ96LI5 555 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TLR10Q9BXR5 811 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KIF9Q9HAQ2 790 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ATP6V0A4Q9HBG4 840 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GGA3Q9NZ52 723 aa17.44■□□□□ 0.38
MAP1LC3B-201ENST00000268607 OPLAHO14841 1288 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PEX19P40855 299 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CDK17Q00537 523 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PAK2Q13177 524 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ITGB3BPQ13352 177 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MAATS1Q7Z4T9 603 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ARMC2Q8NEN0 867 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 AK8Q96MA6 479 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MTMR9Q96QG7 549 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GOLGA6L7A0A1B0GV03 622 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 RHOBTB3O94955 611 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ZNF280AP59817 542 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ACCSLQ4AC99 568 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MIIPQ5JXC2 388 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 EMC10Q5UCC4 262 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SLFN13Q68D06 897 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SLC39A2Q9NP94 309 aa17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 POLR2AP24928 1970 aaKnown RBP17.43■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 EPHB6O15197 1021 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 AKR1B10O60218 316 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GRB10Q13322 594 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GIMAP8Q8ND71 665 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 OSBPL7Q9BZF2 842 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KANSL2Q9H9L4 492 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GPRC5DQ9NZD1 345 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ZBTB5O15062 677 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MARCH6O60337 910 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ANKRD40Q6AI12 368 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CD302Q8IX05 232 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CASKIN2Q8WXE0 1202 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SPDL1Q96EA4 605 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MTMR8Q96EF0 704 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 FAM207AQ9NSI2 230 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PGAP2Q9UHJ9 254 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PLAAQ9Y263 795 aa17.42■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MYH4Q9Y623 1939 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ATP2C2O75185 946 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 NDUFB10O96000 172 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KCNB1Q14721 858 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CFAP221Q4G0U5 840 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KLHDC7AQ5VTJ3 777 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TMEM179Q6ZVK1 233 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms