RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
LSG1-201ENST00000265245 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
LSG1-201ENST00000265245 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
LSG1-201ENST00000265245 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 RNF40O75150 1001 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 MYBL2P10244 700 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 PON1P27169 355 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 C7orf43Q8WVR3 580 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 PARVGQ9HBI0 331 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 ASTN1O14525 1302 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
LSG1-201ENST00000265245 FLOT1O75955 427 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 FTCDO95954 541 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 DNA2P51530 1060 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 PTK2Q05397 1052 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 DLGAP5Q15398 846 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 ZBTB21Q9ULJ3 1066 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 TRIM66O15016 1216 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 CLIC2O15247 247 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 PSMD10O75832 226 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 EZH2Q15910 746 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 HS2ST1Q7LGA3 356 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
LSG1-201ENST00000265245 HDAC7Q8WUI4 952 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 TAF4BQ92750 862 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 SLC35C1Q96A29 364 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 WDR11Q9BZH6 1224 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 POLD4Q9HCU8 107 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
LSG1-201ENST00000265245 SCN9AQ15858 1988 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 GOLGA6BA6NDN3 693 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SFI1A8K8P3 1242 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SLITRK3O94933 977 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 ANXA13P27216 316 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 PRELPP51888 382 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 EPHA7Q15375 998 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 ZSCAN26Q16670 478 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SND1Q7KZF4 910 aaKnown RBP eCLIP11.27□□□□□ -0.6
LSG1-201ENST00000265245 IRF2BP2Q7Z5L9 587 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SLC5A5Q92911 643 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 RBM12Q9NTZ6 932 aaKnown RBP11.27□□□□□ -0.6
LSG1-201ENST00000265245 EHD2Q9NZN4 543 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 FBXL5Q9UKA1 691 aa11.27□□□□□ -0.6
LSG1-201ENST00000265245 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 CASP4P49662 377 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.619e-8■■■■■ 28.4
LSG1-201ENST00000265245 NACC1Q96RE7 527 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 HINFPQ9BQA5 517 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 PACSIN1Q9BY11 444 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 GTPBP10A4D1E9 387 aaKnown RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 MUTP22033 750 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 EPHB4P54760 987 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 UBXN2AP68543 259 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 KCNA1Q09470 495 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 EMBQ6PCB8 327 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 C1orf186Q6ZWK4 172 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 MS4A14Q96JA4 679 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 ZNF577Q9BSK1 485 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
LSG1-201ENST00000265245 CWC15Q9P013 229 aaKnown RBP11.27□□□□□ -0.61
LSG1-201ENST00000265245 BTNL10A8MVZ5 291 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 C21orf2O43822 256 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
LSG1-201ENST00000265245 ACTN2P35609 894 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 PRKCIP41743 596 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 MEI1Q5TIA1 1274 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 ALKBH5Q6P6C2 394 aaKnown RBP11.26□□□□□ -0.61
LSG1-201ENST00000265245 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
LSG1-201ENST00000265245 VEZTQ9HBM0 779 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms