RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 HTTP42858 3142 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 ARID2Q68CP9 1835 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 ARHGEF35A5YM69 484 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 SFI1A8K8P3 1242 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 PGK1P00558 417 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 HSPA8P11142 646 aaKnown RBP10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 IDEP14735 1019 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 GRK4P32298 578 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 RARRES1P49788 294 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 LBX1P52954 281 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 SOX10P56693 466 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 CHMP4BP1P59074 171 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 ZNF445P59923 1031 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 ASIC1P78348 528 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 KMT5BQ4FZB7 885 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 FAM160B1Q5W0V3 765 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 LRSAM1Q6UWE0 723 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 SMYD4Q8IYR2 804 aaPredicted RBP10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 SPATA20Q8TB22 786 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 AP5M1Q9H0R1 490 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 MAGEF1Q9HAY2 307 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 DBR1Q9UK59 544 aaKnown RBP10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 PTPN22Q9Y2R2 807 aa10.84□□□□□ -0.67
SNRNP40-201ENST00000263694 MYH11P35749 1972 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 A6NJR5 290 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 SEPT4O43236 478 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 SMC2O95347 1197 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 OATP04181 439 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 KRT18P05783 430 aaKnown RBP10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 MYL3P08590 195 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 AMPD3Q01432 767 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 GIT2Q14161 759 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 PLCB4Q15147 1175 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 MTERF2Q49AM1 385 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 TRAPPC12Q8WVT3 735 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 ZBTB10Q96DT7 871 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 CCDC34Q96HJ3 373 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 CEP170P1Q96L14 293 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 C16orf70Q9BSU1 422 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 SMARCAD1Q9H4L7 1026 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 ANKEF1Q9NU02 776 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 TBC1D7Q9P0N9 293 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 NRBP1Q9UHY1 535 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 LOXHD1Q8IVV2 1947 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 EMSYQ7Z589 1322 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 SYNRGQ9UMZ2 1314 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 EVPLQ92817 2033 aa10.83□□□□□ -0.68
SNRNP40-201ENST00000263694 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 C6orf222P0C671 652 aaPredicted RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 HSPA1AP0DMV8 641 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 HSPA1BP0DMV9 641 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 XRCC6P12956 609 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 NLRP12P59046 1061 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 MORC3Q14149 939 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 FSCN1Q16658 493 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 DGKDQ16760 1214 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 DPCR1Q3MIW9 517 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 ANO6Q4KMQ2 910 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 OTUD6AQ7L8S5 288 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 PLPPR4Q7Z2D5 763 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 TSPY26PQ9H489 355 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 GPRC5CQ9NQ84 441 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 CYP26B1Q9NR63 512 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 GDAQ9Y2T3 454 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 KAT6AQ92794 2004 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 ZBTB42B2RXF5 422 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 H3BRB1 525 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 DKC1O60832 514 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 RARBP10826 455 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 HOXD8P13378 290 aaPredicted RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 PRMT2P55345 433 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 UNC13DQ70J99 1090 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 DAW1Q8N136 415 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 KCTD17Q8N5Z5 321 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 ATP8B4Q8TF62 1192 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 KAT2BQ92831 832 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 GSDMAQ96QA5 445 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 CEP89Q96ST8 783 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms