RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 HAUS7Q99871 368 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 DMAP1Q9NPF5 467 aaPredicted RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 SEC63Q9UGP8 760 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 CASZ1Q86V15 1759 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 ANKRD62A6NC57 917 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 NVLO15381 856 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 GFPT2O94808 682 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 PTPROQ16827 1216 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 RRAGBQ5VZM2 374 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 MIER3Q7Z3K6 550 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 RTKN2Q8IZC4 609 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 STAG2Q8N3U4 1231 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 DTX3LQ8TDB6 740 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 RAPGEF5Q92565 580 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 SMC6Q96SB8 1091 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 OSBPL3Q9H4L5 887 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 LNPEPQ9UIQ6 1025 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PAPPAQ13219 1627 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 RGS16O15492 202 aaPredicted RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 ZBTB43O43298 467 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 NMT2O60551 498 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 MFAP3LO75121 409 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 STK10O94804 968 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 NDUFA10O95299 355 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 CDC25AP30304 524 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 RASSF2P50749 326 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 POLA2Q14181 598 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PDIA5Q14554 519 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 MAP1SQ66K74 1059 aaPredicted RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 ST13P4Q8IZP2 240 aaPredicted RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 MLKLQ8NB16 471 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 MIS12Q9H081 205 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 SH3GLB1Q9Y371 365 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 ATP6V0A2Q9Y487 856 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 SCN11AQ9UI33 1791 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 A8MUI8 341 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 ADCY3O60266 1144 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 S100BP04271 92 aaPredicted RBP9.05□□□□□ -0.96
LDB3-201ENST00000263066 SLC16A2P36021 539 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 CD151P48509 253 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PCYT1AP49585 367 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 ZBTB16Q05516 673 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 QPCTQ16769 361 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 C6orf163Q5TEZ5 329 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PHLDB3Q6NSJ2 640 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 VPS52Q8N1B4 723 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 EBF2Q9HAK2 575 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 ARHGEF38Q9NXL2 777 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 STOML1Q9UBI4 398 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 MAST3O60307 1309 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 BAZ2BQ9UIF8 2168 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 MAP3K7O43318 606 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 UBOX5O94941 541 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 CCNFP41002 786 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 TNNI2P48788 182 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 CARSP49589 748 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 GMPSP49915 693 aaPredicted RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 ADARP55265 1226 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 TBL3Q12788 808 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 TMCO4Q5TGY1 634 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 NSMFQ6X4W1 530 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 CCDC110Q8TBZ0 833 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 PPP1R14BQ96C90 147 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 DDX50Q9BQ39 737 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 BPIFA3Q9BQP9 254 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.04□□□□□ -0.96
LDB3-201ENST00000263066 LUC7LQ9NQ29 371 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 ANGEL1Q9UNK9 670 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 UBR2Q8IWV8 1755 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 LIN7AO14910 233 aaPredicted RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 CRKP46108 304 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 TNIP1Q15025 636 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 C6orf183Q5T699 404 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 CCDC25Q86WR0 208 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 MLXIPLQ9NP71 852 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 SLC5A4Q9NY91 659 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 SYNRGQ9UMZ2 1314 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 SLCO1A2P46721 670 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 ADAM9Q13443 819 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 GADL1Q6ZQY3 521 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 CCDC51Q96ER9 411 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 DDX18Q9NVP1 670 aaKnown RBP9.04□□□□□ -0.96
LDB3-201ENST00000263066 HYOU1Q9Y4L1 999 aa9.04□□□□□ -0.96
LDB3-201ENST00000263066 ATXN2Q99700 1313 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms