RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 RASGRF2O14827 1237 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 ANP32DO95626 131 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 CLIC4Q9Y696 253 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 OVOS2A0A0G2JMS6 1433 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 SGSM2O43147 1006 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 LRRN2O75325 713 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 ATP5JP18859 108 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 KRT4P19013 534 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 FAM180AQ6UWF9 173 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 LZICQ8WZA0 190 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 ANTXR1Q9H6X2 564 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 C1orf146Q5VVC0 180 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 CRLF3Q8IUI8 442 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 TTC17Q96AE7 1141 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 FAM149B1Q96BN6 582 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 MTRQ99707 1265 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 FBXO2Q9UK22 296 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-202ENST00000262676 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 VCAM1P19320 739 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 TMCO5AQ8N6Q1 288 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 ACRBPQ8NEB7 543 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 TTC1Q99614 292 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
TTC39A-202ENST00000262676 YY1P25490 414 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 C9orf131Q5VYM1 1079 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 CHCHD3Q9NX63 227 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 CCDC195A0A1B0GUA6 201 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 DAB1O75553 588 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 TRPC1P48995 793 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 MFSD14CQ5VZR4 134 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 RFX8Q6ZV50 586 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 RRAGCQ9HB90 399 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 TMEM247A6NEH6 219 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ACSL3O95573 720 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 CCND2P30279 289 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 DYNC1I2Q13409 638 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 BBS9Q3SYG4 887 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 METTL23Q86XA0 190 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 CCDC17Q96LX7 622 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ZBTB18Q99592 522 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ZSCAN9O15535 394 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 NBNO60934 754 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 AFPP02771 609 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 PMLP29590 882 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 HNRNPH2P55795 449 aaKnown RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 KLC3Q6P597 504 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 PARD6BQ9BYG5 372 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 KANSL2Q9H9L4 492 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ACTN3Q08043 901 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-202ENST00000262676 ZSCAN32Q9NX65 697 aa13.78□□□□□ -0.2
TTC39A-202ENST00000262676 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 A0A0D9SFI3 127 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 H0YC42 278 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 PTPREP23469 700 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 ELF1P32519 619 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.2
TTC39A-202ENST00000262676 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.2
TTC39A-202ENST00000262676 B4GALNT2Q8NHY0 566 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 NT5C1BQ96P26 610 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 KCNH4Q9UQ05 1017 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 BNIP3LO60238 219 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 CA4P22748 312 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 RWDD2BP57060 319 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 MTERF2Q49AM1 385 aa13.77□□□□□ -0.2
TTC39A-202ENST00000262676 LCORLQ8N3X6 602 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms