RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 MRPL11Q9Y3B7 192 aaKnown RBP10.75□□□□□ -0.69
TTC39A-201ENST00000262675 MTCH2Q9Y6C9 303 aa10.75□□□□□ -0.69
TTC39A-201ENST00000262675 KIAA1217Q5T5P2 1943 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 CA3P07451 260 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 BMP1P13497 986 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 BMP6P22004 513 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 GNAQP50148 359 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 FAM193AP78312 1265 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
TTC39A-201ENST00000262675 PTGISQ16647 500 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 SPATA1Q5VX52 437 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
TTC39A-201ENST00000262675 ISM2Q6H9L7 571 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 KCNV1Q6PIU1 500 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
TTC39A-201ENST00000262675 VWCEQ96DN2 955 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 SCN5AQ14524 2016 aa10.74□□□□□ -0.69
TTC39A-201ENST00000262675 ABHD14A-ACY1A0A1B0GW23 586 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 SELPP16109 830 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 ATP2C1P98194 919 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 DGKDQ16760 1214 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 FILIP1LQ4L180 1135 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 CCDC62Q6P9F0 684 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 CNKSR3Q6P9H4 555 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 ANKS1AQ92625 1134 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 BAG1Q99933 345 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 DDX41Q9UJV9 622 aaKnown RBP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 A0A1B0GTH6 734 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 MMP3P08254 477 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 TAP1Q03518 808 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 SPAG1Q07617 926 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 LAMC2Q13753 1193 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 NR1I3Q14994 352 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 IQUBQ8NA54 791 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 PANX2Q96RD6 677 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
TTC39A-201ENST00000262675 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC39A-201ENST00000262675 CNTNAP5Q8WYK1 1306 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 TLL1O43897 1013 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 EIF3JO75822 258 aaKnown RBP10.72□□□□□ -0.69
TTC39A-201ENST00000262675 MYL1P05976 194 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 SCG2P13521 617 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 MYOGP15173 224 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 TUBB4BP68371 445 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 PFKFB3Q16875 520 aaPredicted RBP10.72□□□□□ -0.69
TTC39A-201ENST00000262675 SYT10Q6XYQ8 523 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 HLA-CQ95604 372 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 RMND1Q9NWS8 449 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 VPS54Q9P1Q0 977 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 DNAI1Q9UI46 699 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 EMSYQ7Z589 1322 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 CXCL10P02778 98 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 GRIN1Q05586 938 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 DPYDQ12882 1025 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 PTK7Q13308 1070 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 TUBB2AQ13885 445 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 CDC37Q16543 378 aaPredicted RBP10.72□□□□□ -0.69
TTC39A-201ENST00000262675 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 LRRC8DQ7L1W4 858 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 REXO1L1PQ8IX06 675 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 PAGE5Q96GU1 130 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 ZBED2Q9BTP6 218 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 TUBB2BQ9BVA1 445 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 ARGLU1Q9NWB6 273 aaPredicted RBP10.72□□□□□ -0.69
TTC39A-201ENST00000262675 PPP2R2CQ9Y2T4 447 aa10.72□□□□□ -0.69
TTC39A-201ENST00000262675 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.69
TTC39A-201ENST00000262675 ITIH6Q6UXX5 1313 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 LONP1P36776 959 aaKnown RBP10.71□□□□□ -0.69
TTC39A-201ENST00000262675 PLA2G5P39877 138 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 TXLNAP40222 546 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
TTC39A-201ENST00000262675 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 USH1GQ495M9 461 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 ARHGEF16Q5VV41 709 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 FBXO11Q86XK2 927 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 CREBRFQ8IUR6 639 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 ANKRD20A12PQ8NF67 263 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 PPTC7Q8NI37 304 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 SYTL5Q8TDW5 730 aaPredicted RBP10.71□□□□□ -0.69
TTC39A-201ENST00000262675 AFG1LQ8WV93 481 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 DHX58Q96C10 678 aa10.71□□□□□ -0.69
TTC39A-201ENST00000262675 FAM122AQ96E09 287 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms