RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 SPATA31A3Q5VYP0 1347 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 USP11P51784 963 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 ISLR2Q6UXK2 745 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 BATF3Q9NR55 127 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 KCNQ4P56696 695 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 GSTA5Q7RTV2 222 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 ZFATQ9P243 1243 aa17.22■□□□□ 0.35
PRPF40B-201ENST00000261897 NEO1Q92859 1461 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 LUC7L3O95232 432 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 KCNMA1Q12791 1236 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 PICALMQ13492 652 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 SEL1L2Q5TEA6 688 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 SPATA21Q7Z572 469 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 LRRC47Q8N1G4 583 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 GBP5Q96PP8 586 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 A0A1W2PQJ5 194 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 SSU72P8A0A1W2PR75 194 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 MGRN1O60291 552 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 COPS2P61201 443 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 COASYQ13057 564 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 AGBL2Q5U5Z8 902 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 UNC13DQ70J99 1090 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 MCUR1Q96AQ8 359 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 CHMP2AO43633 222 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 GALCP54803 685 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 ITIH3Q06033 890 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 NPY5RQ15761 445 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 STMN2Q93045 179 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 NUCKS1Q9H1E3 243 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
PRPF40B-201ENST00000261897 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 ATMINO43313 823 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 GNAQP50148 359 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 SLC8A3P57103 927 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 RCN2Q14257 317 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 VPS52Q8N1B4 723 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CCSER1Q9C0I3 900 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CFAP73A6NFT4 308 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 RFC5P40937 340 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 UBAP2Q5T6F2 1119 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 KCNK18Q7Z418 384 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 SYCE1Q8N0S2 351 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CCHCR1Q8TD31 782 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 C1orf54Q8WWF1 131 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 PCDHA12Q9UN75 941 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CCDC188H7C350 402 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 GH1P01241 217 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CCND1P24385 295 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 PPP1R2P41236 205 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 DNAJC3Q13217 504 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 SYCP3Q8IZU3 236 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 NAGPAQ9UK23 515 aa17.2■□□□□ 0.34
PRPF40B-201ENST00000261897 TBCAO75347 108 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 DNAJC8O75937 253 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 UBTFL6P0CB48 400 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 ZCCHC18P0CG32 403 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 STAT3P40763 770 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 RWDD2BP57060 319 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 C6orf118Q5T5N4 469 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 JAMLQ86YT9 394 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 POTECB2RU33 542 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 TXNDC9O14530 226 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 SLC16A2P36021 539 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 ZNF76P36508 570 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 PAPOLAP51003 745 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 NCALDP61601 193 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 LRRC63Q05C16 580 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 KYNUQ16719 465 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 LRRC36Q1X8D7 754 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 FGFBP2Q9BYJ0 223 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 VCXQ9H320 206 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 FUT2Q10981 343 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 KIAA1755Q5JYT7 1200 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 HGSNATQ68CP4 663 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 CENPPQ6IPU0 288 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 GUF1Q8N442 669 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 C9orf72Q96LT7 481 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 RPS6KC1Q96S38 1066 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms