RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 HOOK2Q96ED9 719 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 IRAK4Q9NWZ3 460 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 NCF2P19878 526 aaPredicted RBP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ARFIP2P53365 341 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 STX1BP61266 288 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 AGGF1Q8N302 714 aaeCLIP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 LAMC1P11047 1609 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 SH3BP5O60239 455 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZRANB2O95218 330 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TNNC2P02585 160 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ART3Q13508 389 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 DNAJC24Q6P3W2 148 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TRPM8Q7Z2W7 1104 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 HIPK4Q8NE63 616 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 NRBF2Q96F24 287 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 GINM1Q9NU53 330 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 DCTN4Q9UJW0 460 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 COPEO14579 308 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 AP5Z1O43299 807 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TEX9Q8N6V9 391 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 FAM96AQ9H5X1 160 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMEM51Q9NW97 253 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TRIM10Q9UDY6 481 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 MID2Q9UJV3 735 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCT8L1PA6NM43 557 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 TCP11X1B4DZS4 312 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 MEIS1O00470 390 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZBED4O75132 1171 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ARL4CP56559 192 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 CUL3Q13618 768 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 COA7Q96BR5 231 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
CSNK1A1-201ENST00000261798 CYP2D7A0A087X1C5 515 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CHN1P15882 459 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ECE1P42892 770 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CYB5D1Q6P9G0 228 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 RFFLQ8WZ73 363 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCDC138Q96M89 665 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 TTC1Q99614 292 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ANLNQ9NQW6 1124 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 RBM12Q9NTZ6 932 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 SAT1P21673 171 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 MRPS35P82673 323 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ANO5Q75V66 913 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ADSSL1Q8N142 457 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 HESX1Q9UBX0 185 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 GGPS1O95749 300 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 SATB1Q01826 763 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ICA1Q05084 483 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCDC137Q6PK04 289 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ORC2Q13416 577 aaPredicted RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 RSBN1LQ6PCB5 846 aaPredicted RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 PCGF5Q86SE9 256 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 ELOA2Q8IYF1 753 aaPredicted RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 TRIM56Q9BRZ2 755 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 PCIF1Q9H4Z3 704 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 SENP1Q9P0U3 644 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 BAG5Q9UL15 447 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 APOBEC2Q9Y235 224 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CFLARO15519 480 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 TJP3O95049 919 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 CARSP49589 748 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 DYNLT1P63172 113 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 SLC20A2Q08357 652 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 DPYDQ12882 1025 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 KLHL38Q2WGJ6 581 aa11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 UPF3AQ9H1J1 476 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
CSNK1A1-201ENST00000261798 H3BQF6 201 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 GTF2IP78347 998 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 BRDTQ58F21 947 aaPredicted RBP11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 PRMT1Q99873 361 aaKnown RBP11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 ANAPC7Q9UJX3 599 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 TTLL1O95922 423 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 PDCD2Q16342 344 aaPredicted RBP11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 DARS2Q6PI48 645 aaKnown RBP11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 KDM7AQ6ZMT4 941 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 MS4A14Q96JA4 679 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 METP08581 1390 aa11.6□□□□□ -0.55
CSNK1A1-201ENST00000261798 CFAP69A5D8W1 941 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms