RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CCT6BQ92526 530 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 STAMBPL1Q96FJ0 436 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 AZI2Q9H6S1 392 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
LMNB1-201ENST00000261366 CHORDC1Q9UHD1 332 aaPredicted RBP17.32■□□□□ 0.36
LMNB1-201ENST00000261366 NRAPQ86VF7 1730 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 TRIM37O94972 964 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 MTMR3Q13615 1198 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 CCDC197Q8NCU1 140 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 MIEF2Q96C03 454 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 POTEFA5A3E0 1075 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 GNPATO15228 680 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 H2AFZP0C0S5 128 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 POTEIP0CG38 1075 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 DRP2Q13474 957 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 H2AFVQ71UI9 128 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 LRRC34Q8IZ02 419 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
LMNB1-201ENST00000261366 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 PCDHB13Q9Y5F0 798 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 MYH7BA7E2Y1 1941 aa17.31■□□□□ 0.36
LMNB1-201ENST00000261366 ELF3P78545 371 aaPredicted RBP17.3■□□□□ 0.36
LMNB1-201ENST00000261366 PSMD2Q13200 908 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 LRRC14Q15048 493 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 VPS72Q15906 364 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 RPAINQ86UA6 219 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 AMIGO3Q86WK7 504 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 GLYCTKQ8IVS8 523 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 HAS1Q92839 578 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 NLRP3Q96P20 1036 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 ARMCX3Q9UH62 379 aaPredicted RBP17.3■□□□□ 0.36
LMNB1-201ENST00000261366 WNK3Q9BYP7 1800 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 CASP4P49662 377 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 WLSQ5T9L3 541 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 EP400Q96L91 3159 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 TMEM110-MUSTN1A8MSY1 372 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 FLOT1O75955 427 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 PON1P27169 355 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 PABPC4Q13310 644 aaKnown RBP eCLIP17.3■□□□□ 0.362e-40■■■■■ 32.5
LMNB1-201ENST00000261366 TMEM119Q4V9L6 283 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 GGA2Q9UJY4 613 aa17.3■□□□□ 0.36
LMNB1-201ENST00000261366 CCT8L1PA6NM43 557 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 SFI1A8K8P3 1242 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 ATP6V1G2O95670 118 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 GALCP54803 685 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
LMNB1-201ENST00000261366 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
LMNB1-201ENST00000261366 TTBK2Q6IQ55 1244 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 CCDC25Q86WR0 208 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
LMNB1-201ENST00000261366 CCDC63Q8NA47 563 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 C1orf131Q8NDD1 294 aaKnown RBP17.29■□□□□ 0.36
LMNB1-201ENST00000261366 FOXO6A8MYZ6 492 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 BAG3O95817 575 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 FGFR4P22455 802 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 KCNA1Q09470 495 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 CEP63Q96MT8 703 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 TACO1Q9BSH4 297 aaKnown RBP17.29■□□□□ 0.36
LMNB1-201ENST00000261366 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■■■ 42.6
LMNB1-201ENST00000261366 GCNT4Q9P109 453 aa17.29■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L15C9J2P7 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L13C9JLJ4 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L11C9JVI0 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L18D6R9N7 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L22D6RA61 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L17D6RBQ6 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L19D6RCP7 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L20D6RJB6 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 DDX3XO00571 662 aaKnown RBP eCLIP17.28■□□□□ 0.368e-31■■■□□ 15.3
LMNB1-201ENST00000261366 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 XRCC5P13010 732 aaKnown RBP17.28■□□□□ 0.36
LMNB1-201ENST00000261366 PSMC6P62333 389 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 DR1Q01658 176 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L24Q0WX57 530 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 PICALMQ13492 652 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 SLC29A2Q14542 456 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 ERMARDQ5T6L9 678 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 NT5DC3Q86UY8 548 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 FBXO25Q8TCJ0 367 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 EPS8L3Q8TE67 593 aaKnown RBP17.28■□□□□ 0.36
LMNB1-201ENST00000261366 ABCF3Q9NUQ8 709 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 USP21Q9UK80 565 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 AMFRQ9UKV5 643 aa17.28■□□□□ 0.36
LMNB1-201ENST00000261366 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms