RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 RAD21O60216 631 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 PLEKP08567 350 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 PAEPP09466 180 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 CXCR5P32302 372 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 STK4Q13043 487 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 DLGAP5Q15398 846 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 NBPF9Q3BBW0 867 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 Q4G0T1 1027 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 AGBL2Q5U5Z8 902 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 CYB5D1Q6P9G0 228 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 CASKIN2Q8WXE0 1202 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 N4BP2L2Q92802 583 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 PRMT6Q96LA8 375 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM20AQ96MK3 541 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 GOPCQ9HD26 462 aa11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 LUC7LQ9NQ29 371 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-201ENST00000261007 POTEMA6NI47 508 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 YDJCA8MPS7 323 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 TBC1D12O60347 775 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 GH2P01242 217 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 SREBF1P36956 1147 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 TNNC1P63316 161 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 SATB1Q01826 763 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 IKQ13123 557 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 XRCC4Q13426 336 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 CCDC65Q8IXS2 484 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 AGBL3Q8NEM8 1001 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 LRRC45Q96CN5 670 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 NUCKS1Q9H1E3 243 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 ISCUQ9H1K1 167 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 EHMT1Q9H9B1 1298 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 PLAAQ9Y263 795 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM196BA6NMK8 535 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 MEIS2O14770 477 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 NCK2O43639 380 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 PLA2G6O60733 806 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 GDF11O95390 407 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CIITAP33076 1130 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 EHHADHQ08426 723 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CUL1Q13616 776 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 DDX12PQ92771 950 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 KDM4CQ9H3R0 1056 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 TAF1DQ9H5J8 278 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 SMARCAL1Q9NZC9 954 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 PITPNM2Q9BZ72 1349 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 A0A1B0GUA9 196 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CCDC189A1A4V9 331 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 H0YGN5 161 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CYP3A4P08684 503 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 STAT2P52630 851 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 MAN2A1Q16706 1144 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 TLDC1Q6P9B6 456 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 MAATS1Q7Z4T9 603 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 FMNL3Q8IVF7 1028 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 CHURC1Q8WUH1 139 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 GMLQ99445 158 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 NDST4Q9H3R1 872 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 SALL4Q9UJQ4 1053 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 TMEM59LQ9UK28 342 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 NFS1Q9Y697 457 aa11.79□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
CHRNA1-201ENST00000261007 MGRN1O60291 552 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms