RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 TMX4Q9H1E5 349 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-201ENST00000260810 C22orf31O95567 290 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 ERCC3P19447 782 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 VEGFBP49765 207 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 PPATQ06203 517 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 DLGAP5Q15398 846 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 MIOSQ9NXC5 875 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 SLC12A7Q9Y666 1083 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 GOLGA6L6A8MZA4 724 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 RPA1P27694 616 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 SF3B2Q13435 895 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 KRT32Q14532 448 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 LRRC41Q15345 812 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 GJA3Q9Y6H8 435 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 LYPLA2O95372 231 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 CHRNA1P02708 482 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 POU5F1Q01860 360 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 SIX1Q15475 284 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 ANO6Q4KMQ2 910 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 XKR4Q5GH76 650 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 DCAF4Q8WV16 495 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 EMID1Q96A84 441 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 VAT1LQ9HCJ6 419 aa6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 CCND3P30281 292 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 MKRN3Q13064 507 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 CDCA2Q69YH5 1023 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-201ENST00000260810 TSPY3P0CV98 308 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 TSPY8P0CW00 308 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 MCM7P33993 719 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 HOMER1Q86YM7 354 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 TRIM59Q8IWR1 403 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 PCDHB18PQ96TA0 734 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 MXRA8Q9BRK3 442 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 PCSK5Q92824 1860 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 SYNRGQ9UMZ2 1314 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 DEKP35659 375 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 RNF168Q8IYW5 571 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 ATP2A3Q93084 1043 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 CBWD1Q9BRT8 395 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 TOPORSQ9NS56 1045 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 NMT1P30419 496 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 CCAR1Q8IX12 1150 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 FBXO16Q8IX29 292 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 NIM1KQ8IY84 436 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 GRPEL1Q9HAV7 217 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 KCNH3Q9ULD8 1083 aa6.4□□□□□ -1.38
TOPBP1-201ENST00000260810 PPIL2Q13356 520 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 MEA1Q16626 185 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 ASPRV1Q53RT3 343 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 ZSCAN31Q96LW9 406 aaPredicted RBP6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 LCA5LO95447 670 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 ERVK-9P63128 1117 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 MTFR1Q15390 333 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 TTC38Q5R3I4 469 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 DDX12PQ92771 950 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 MYEOVQ96EZ4 313 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.4□□□□□ -1.392e-7■□□□□ 9.3
TOPBP1-201ENST00000260810 EPC1Q9H2F5 836 aa6.4□□□□□ -1.39
TOPBP1-201ENST00000260810 ATG2BQ96BY7 2078 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 CKAP5Q14008 2032 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 NCKAP1LP55160 1127 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 MOXD1Q6UVY6 613 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF720Q7Z2F6 126 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 CTU1Q7Z7A3 348 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 C8orf76Q96K31 380 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 WNT8AQ9H1J5 351 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 GPR25O00155 361 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 PTGESO14684 152 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 HNRNPH3P31942 346 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 SEZ6Q53EL9 994 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 TOGARAM2Q6ZUX3 1019 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 AFAP1L1Q8TED9 768 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 DIS3LQ8TF46 1054 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 TIGD1Q96MW7 591 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 WDR24Q96S15 920 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 EIF2AK1Q9BQI3 630 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 UBXN6Q9BZV1 441 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 PIKFYVEQ9Y2I7 2098 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 BIN1O00499 593 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 ACTN1P12814 892 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 GLRA2P23416 452 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 ADCYAP1R1P41586 468 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 RTN4Q9NQC3 1192 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 PAK6Q9NQU5 681 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 PIEZO2Q9H5I5 2752 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 ZFC3H1O60293 1989 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 TULP2O00295 520 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 WDR46O15213 610 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 FYNP06241 537 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms