RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 EPB41L4BQ9H329 900 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ECT2Q9H8V3 914 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 COL1A1P02452 1464 aaPredicted RBP12.5□□□□□ -0.41
TROAP-201ENST00000257909 SHBGP04278 402 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 PRKCIP41743 596 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 DRG2P55039 364 aaKnown RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 TFAP4Q01664 338 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 EVX2Q03828 476 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 COASYQ13057 564 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 BIRC2Q13490 618 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 BLMHQ13867 455 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 PDIA5Q14554 519 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 CALCRLQ16602 461 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TAOK1Q7L7X3 1001 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 KLHL29Q96CT2 875 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TAF1P21675 1872 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TLDC2A0PJX2 215 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
TROAP-201ENST00000257909 SUN1O94901 812 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 FGGP02679 453 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 H2AFZP0C0S5 128 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 GBP1P32455 592 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 COPS2P61201 443 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 ATP11AP98196 1134 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 DR1Q01658 176 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 SLC35G1Q2M3R5 365 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 H2AFVQ71UI9 128 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 GLIS3Q8NEA6 775 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TBCKQ8TEA7 893 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TRIM51Q9BSJ1 452 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TMEM109Q9BVC6 243 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 TRIM31Q9BZY9 425 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
TROAP-201ENST00000257909 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
TROAP-201ENST00000257909 SPDYE3A6NKU9 549 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 PEX19P40855 299 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 GYG1P46976 350 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 BNIP1Q12981 228 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 CAVIN4Q5BKX8 364 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 TEX9Q8N6V9 391 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 ZNF384Q8TF68 577 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 ARHGEF3Q9NR81 526 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 IL17RBQ9NRM6 502 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 RASAL2Q9UJF2 1139 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 ANKRD33BA6NCL7 494 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 O00370 1275 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 IRF6O14896 467 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 KLRC3Q07444 240 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 KCNH2Q12809 1159 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 PTPROQ16827 1216 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
TROAP-201ENST00000257909 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 NENFQ9UMX5 172 aa12.48□□□□□ -0.41
TROAP-201ENST00000257909 CYP2D6P10635 497 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 UCHL3P15374 230 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 MSH2P43246 934 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
TROAP-201ENST00000257909 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 RBBP5Q15291 538 aaKnown RBP12.47□□□□□ -0.41
TROAP-201ENST00000257909 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 SUSD4Q5VX71 490 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
TROAP-201ENST00000257909 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
TROAP-201ENST00000257909 DNAJC19Q96DA6 116 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 PARP2Q9UGN5 583 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 LAMB2P55268 1798 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 WFS1O76024 890 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
TROAP-201ENST00000257909 CNGA2Q16280 664 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms