RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 RASSF9O75901 435 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 IFNB1P01574 187 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 EIF3BP55884 814 aaKnown RBP13.34□□□□□ -0.27
USP30-201ENST00000257548 LRRC63Q05C16 580 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
USP30-201ENST00000257548 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
USP30-201ENST00000257548 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 PIGBQ92521 554 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 TGS1Q96RS0 853 aaKnown RBP13.34□□□□□ -0.27
USP30-201ENST00000257548 GDF3Q9NR23 364 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 ZBTB21Q9ULJ3 1066 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 PRLRP16471 622 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 CTNNA2P26232 953 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 VPS37BQ9H9H4 285 aa13.34□□□□□ -0.27
USP30-201ENST00000257548 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 ADCY7P51828 1080 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 MIIPQ5JXC2 388 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 C6orf118Q5T5N4 469 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 LRRC37A3O60309 1634 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 TMEM120BA0PK00 339 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 AK8Q96MA6 479 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 KBTBD4Q9NVX7 518 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 SSU72P8A0A1W2PR75 194 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 LDHBP07195 334 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 NQO1P15559 274 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 HSPA9P38646 679 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 PRPHP41219 470 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 CETN1Q12798 172 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 COASYQ13057 564 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 TATDN2Q93075 761 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 ERP27Q96DN0 273 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 RAB3IPQ96QF0 476 aaPredicted RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 EYA3Q99504 573 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 CCSER1Q9C0I3 900 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 CUEDC2Q9H467 287 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
USP30-201ENST00000257548 USP15Q9Y4E8 981 aaPredicted RBP13.33□□□□□ -0.28
USP30-201ENST00000257548 ORC4O43929 436 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 EXOC3O60645 756 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 MYL1P05976 194 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 MECOMQ03112 1051 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 SEC23AQ15436 765 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 APBB1IPQ7Z5R6 666 aaPredicted RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 YTHDF3Q7Z739 585 aaKnown RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 GUF1Q8N442 669 aaKnown RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 RIC8AQ9NPQ8 531 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 POTECB2RU33 542 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 AFPP02771 609 aaKnown RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 GNAT1P11488 350 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 GALCP54803 685 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 PRR16Q569H4 304 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 BZW1Q7L1Q6 419 aaKnown RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 CCHCR1Q8TD31 782 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 DCP1AQ9NPI6 582 aaPredicted RBP13.32□□□□□ -0.28
USP30-201ENST00000257548 WDR17Q8IZU2 1322 aa13.32□□□□□ -0.28
USP30-201ENST00000257548 USP11P51784 963 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 USH1GQ495M9 461 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 CFAP157Q5JU67 520 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 AADACL2Q6P093 401 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 F8VZ95 297 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
USP30-201ENST00000257548 MEI1Q5TIA1 1274 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 BARGINQ6ZT62 677 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 SPATA21Q7Z572 469 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
USP30-201ENST00000257548 C18orf8Q96DM3 657 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 HEMGNQ9BXL5 484 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 BATF3Q9NR55 127 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 MED1Q15648 1581 aaPredicted RBP13.31□□□□□ -0.28
USP30-201ENST00000257548 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 CFAP73A6NFT4 308 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 OPHN1O60890 802 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 UCHL3P15374 230 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 ATP5DP30049 168 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 STAT3P40763 770 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 ADCY2Q08462 1091 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 ANKRD20A2Q5SQ80 823 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 ANKRD20A1Q5TYW2 823 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 ANKRD20A3Q5VUR7 823 aa13.31□□□□□ -0.28
USP30-201ENST00000257548 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms