RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 APLP1P51693 650 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 FANCCQ00597 558 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 MAPK7Q13164 816 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.48□□□□□ -0.73
NIP7-202ENST00000254941 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 GLIS3Q8NEA6 775 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 AFAP1L1Q8TED9 768 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 SEPT1Q8WYJ6 367 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 USP6NLQ92738 828 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 CAPNS2Q96L46 248 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 CCDC43Q96MW1 224 aaKnown RBP10.48□□□□□ -0.73
NIP7-202ENST00000254941 TIPINQ9BVW5 301 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 ABHD16BQ9H3Z7 469 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 PARVGQ9HBI0 331 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 ZNF302Q9NR11 478 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 TBC1D7Q9P0N9 293 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 SEL1LQ9UBV2 794 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 ZSWIM8A7E2V4 1837 aa10.48□□□□□ -0.73
NIP7-202ENST00000254941 FAM13AO94988 1023 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 CDC25BP30305 580 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 NPEPPSP55786 919 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 PRKCEQ02156 737 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 IRF5Q13568 498 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 LRRC41Q15345 812 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 TPD52L1Q16890 204 aaPredicted RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 HSDL1Q3SXM5 330 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 XKR3Q5GH77 459 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 ANKRD40Q6AI12 368 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 EPM2AIP1Q7L775 607 aaPredicted RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 DAW1Q8N136 415 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 SCFD1Q8WVM8 642 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 SOCS4Q8WXH5 440 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 PCYT2Q99447 389 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 GPR20Q99678 358 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 SEMA6BQ9H3T3 888 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 IFNKQ9P0W0 207 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 CASP8AP2Q9UKL3 1982 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 EVPLQ92817 2033 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 SFI1A8K8P3 1242 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 NOP56O00567 594 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 AOC2O75106 756 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 HIP1RO75146 1068 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 KIF20AO95235 890 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 ATP4AP20648 1035 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 CDK11BP21127 795 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 CASP5P51878 434 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 HSP90AA4PQ58FG1 418 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 TMEM63BQ5T3F8 832 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 PLA2G4FQ68DD2 849 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 TRMT1LQ7Z2T5 733 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 MYCT1Q8N699 235 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 FIZ1Q96SL8 496 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 SH2D3AQ9BRG2 576 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 XPO4Q9C0E2 1151 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 MRPL44Q9H9J2 332 aaKnown RBP10.47□□□□□ -0.73
NIP7-202ENST00000254941 POLD4Q9HCU8 107 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 HTTP42858 3142 aa10.47□□□□□ -0.73
NIP7-202ENST00000254941 TNPO2O14787 897 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 USO1O60763 962 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 LGR5O75473 907 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 SERPINC1P01008 464 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 OATP04181 439 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 STAT5BP51692 787 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 UBASH3AP57075 661 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 ARHGAP1Q07960 439 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 ACVR2BQ13705 512 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 LAMC2Q13753 1193 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 IRF2BP1Q8IU81 584 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 NOC3LQ8WTT2 800 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 COPS5Q92905 334 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 CEP170P1Q96L14 293 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 DRC1Q96MC2 740 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 NIFKQ9BYG3 293 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 THAP9Q9H5L6 903 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 PDLIM7Q9NR12 457 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 CYP26B1Q9NR63 512 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 LARSQ9P2J5 1176 aaKnown RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.74
NIP7-202ENST00000254941 EMSYQ7Z589 1322 aa10.46□□□□□ -0.74
NIP7-202ENST00000254941 LRRC10BA6NIK2 292 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
NIP7-202ENST00000254941 CBFA2T2O43439 604 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 DGAT1O75907 488 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms