RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ZC3H15Q8WU90 426 aaKnown RBP12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 AGPAT5Q9NUQ2 364 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 DENND3A2RUS2 1198 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 SOCS7O14512 581 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ZNF862O60290 1169 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
LIN28A-201ENST00000254231 GTF2A2P52657 109 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 PPIL2Q13356 520 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 TCP11X2Q5H9J9 407 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 ENOX1Q8TC92 643 aaKnown RBP12.82□□□□□ -0.36
LIN28A-201ENST00000254231 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
LIN28A-201ENST00000254231 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 CETN3O15182 167 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ARMCX5Q6P1M9 558 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 LRRC8AQ8IWT6 810 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 POMGNT1Q8WZA1 660 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 PYM1Q9BRP8 204 aaKnown RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 KMT5AQ9NQR1 393 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 LARSQ9P2J5 1176 aaKnown RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 STK17AQ9UEE5 414 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 DOCK3Q8IZD9 2030 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 CXCL11O14625 94 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 POLR2FP61218 127 aaKnown RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SPECC1LQ69YQ0 1117 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SLC7A3Q8WY07 619 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ASTN1O14525 1302 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 VTNP04004 478 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 CCNE1P24864 410 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 GCLMP48507 274 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 HSD17B4P51659 736 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 BIRC3Q13489 604 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 EPHA7Q15375 998 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 ZBTB45Q96K62 511 aaPredicted RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SPAG5Q96R06 1193 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 NAP1L4Q99733 375 aaKnown RBP12.81□□□□□ -0.36
LIN28A-201ENST00000254231 CBWD1Q9BRT8 395 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 SPTLC3Q9NUV7 552 aa12.81□□□□□ -0.36
LIN28A-201ENST00000254231 LRRC37AA6NMS7 1700 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 ANO5Q75V66 913 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
LIN28A-201ENST00000254231 ACRBPQ8NEB7 543 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 UBE2Q2Q8WVN8 375 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 HSD3B7Q9H2F3 369 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 EIF3JO75822 258 aaKnown RBP12.8□□□□□ -0.36
LIN28A-201ENST00000254231 PSAPP07602 524 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 MYL3P08590 195 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 CHP1Q99653 195 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 SSC5DA1L4H1 1573 aa12.8□□□□□ -0.36
LIN28A-201ENST00000254231 MACROD2A1Z1Q3 448 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 KRT19P08727 400 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RARRES1P49788 294 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 PSMC5P62195 406 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 MAP3K10Q02779 954 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 Q4G0T1 1027 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 BAG1Q99933 345 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RHOBTB3O94955 611 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 EYA4O95677 639 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 TNNI1P19237 187 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 PSMC4P43686 418 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 CRHR2Q13324 411 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 ZFYVE27Q5T4F4 411 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 MIS18BP1Q6P0N0 1132 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 HAUS6Q7Z4H7 955 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 GPR142Q7Z601 462 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 RGS22Q8NE09 1264 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 ATP6V0A1Q93050 837 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
LIN28A-201ENST00000254231 DNAI1Q9UI46 699 aa12.79□□□□□ -0.36
LIN28A-201ENST00000254231 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms