RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SH2D3AQ9BRG2 576 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 TTC12Q9H892 705 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 RGL1Q9NZL6 768 aa20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 SEPT9Q9UHD8 586 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-201ENST00000254193 H3BQV1 296 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 P4HBP07237 508 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 MYOGP15173 224 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 QARSP47897 775 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 KCNJ6P48051 423 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 TOB1P50616 345 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 DEFB103AP81534 67 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 ZNF697Q5TEC3 545 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 TMCO2Q7Z6W1 182 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 TIFAQ96CG3 184 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 SLC9A7Q96T83 725 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 NIFKQ9BYG3 293 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 TTYH1Q9H313 450 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 WRAP73Q9P2S5 460 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 MSRAQ9UJ68 235 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 NOL7Q9UMY1 257 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 YBX2Q9Y2T7 364 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 TRPV2Q9Y5S1 764 aa20.17■□□□□ 0.82
SNRPA1-201ENST00000254193 M0QZ92 97 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 MAGEB2O15479 319 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 TRAPPC10P48553 1259 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 CLCN3P51790 818 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 TARBP2Q15633 366 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 MTERF2Q49AM1 385 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 FBXO47Q5MNV8 452 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.16■□□□□ 0.827e-6■□□□□ 8.4
SNRPA1-201ENST00000254193 HERC6Q8IVU3 1022 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 LRRC71Q8N4P6 559 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 PHOSPHO2Q8TCD6 241 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 DYDC2Q96IM9 177 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 PPP1R16BQ96T49 567 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 MTMR10Q9NXD2 777 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 GINS2Q9Y248 185 aa20.16■□□□□ 0.82
SNRPA1-201ENST00000254193 EFCAB14O75071 495 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 TBC1D8BQ0IIM8 1120 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 MKRN4PQ13434 485 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 CTTNQ14247 550 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 RAB30Q15771 203 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 PLA2G4FQ68DD2 849 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 EFCAB12Q6NXP0 572 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 ANO5Q75V66 913 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 LXNQ9BS40 222 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 NKX2-4Q9H2Z4 354 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 SUGCTQ9HAC7 445 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 CDHR5Q9HBB8 845 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 SCN5AQ14524 2016 aa20.15■□□□□ 0.82
SNRPA1-201ENST00000254193 SLITRK3O94933 977 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 VTNP04004 478 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 OR52Z1P0C646 297 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 CD52P31358 61 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 NPEPPSP55786 919 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 ORC2Q13416 577 aaPredicted RBP20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 KIZQ2M2Z5 673 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 TSHZ1Q6ZSZ6 1077 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 TPH2Q8IWU9 490 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 LINC01465Q8N7H1 131 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 CEP89Q96ST8 783 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 EIF2AK1Q9BQI3 630 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 PCDHB6Q9Y5E3 794 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 PCDHA11Q9Y5I1 949 aa20.14■□□□□ 0.81
SNRPA1-201ENST00000254193 TANC1Q9C0D5 1861 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 POTEMA6NI47 508 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 ZBTB39O15060 712 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 DKC1O60832 514 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 FAM117BQ6P1L5 589 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 C4orf19Q8IY42 314 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 C4orf32Q8N8J7 132 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 ZNF579Q8NAF0 562 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 APBB2Q92870 758 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 HSD17B14Q9BPX1 270 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 ZNF576Q9H609 170 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 AKT3Q9Y243 479 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 SZT2Q5T011 3432 aa20.13■□□□□ 0.81
SNRPA1-201ENST00000254193 KDM3AQ9Y4C1 1321 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 TMEM265A0A087WTH1 108 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 TMOD1P28289 359 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 YWHABP31946 246 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 TECP42680 631 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 DRP2Q13474 957 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 TMEM266Q2M3C6 531 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 TMEM40Q8WWA1 233 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 GUCD1Q96NT3 240 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 MAP7D2Q96T17 732 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 ZBED2Q9BTP6 218 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 CYP26B1Q9NR63 512 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms