RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 ZBTB16Q05516 673 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 ARMC2Q8NEN0 867 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 ADAMTS3O15072 1205 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 CYP2J2P51589 502 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 ARHGEF2Q92974 986 aaKnown RBP17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 ECT2Q9H8V3 914 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 TRAPPC3O43617 180 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 FGFR4P22455 802 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 FAM47EQ6ZV65 393 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 GLIS3Q8NEA6 775 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 RAD54LQ92698 747 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 NPHP3-ACAD11A0A0J9YXS1 232 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 EVI5O60447 810 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 SMIM24O75264 130 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 ANP32DO95626 131 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 PDE6CP51160 858 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 SNX1Q13596 522 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 CAPN12Q6ZSI9 719 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 YTHDF3Q7Z739 585 aaKnown RBP17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 EDEM3Q9BZQ6 932 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 SIK3Q9Y2K2 1263 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 USP11P51784 963 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 ZNF131P52739 623 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 GSTO1P78417 241 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 FUT2Q10981 343 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 CRYMQ14894 314 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 MEI1Q5TIA1 1274 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 CROCCP2Q86T23 111 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 VGLL2Q8N8G2 317 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 DNM1LO00429 736 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 CHMP2AO43633 222 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 PLA2G4BP0C869 781 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 FGFR2P21802 821 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 ALDH3A1P30838 453 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 C6orf118Q5T5N4 469 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 AGBL2Q5U5Z8 902 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 MAEAQ7L5Y9 396 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 GLYCTKQ8IVS8 523 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 P3H4Q92791 437 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
SLC6A8-201ENST00000253122 WTIPA6NIX2 430 aaPredicted RBP17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 PDHA1P08559 390 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 PSMD2Q13200 908 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 BYSLQ13895 437 aaKnown RBP17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 GNPTABQ3T906 1256 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 PLVAPQ9BX97 442 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 ATP5DP30049 168 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 DDR1Q08345 913 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 PROM2Q8N271 834 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 MYCT1Q8N699 235 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
SLC6A8-201ENST00000253122 ORC4O43929 436 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 GSCP56915 257 aaPredicted RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 SLC29A2Q14542 456 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 TTYH3Q9C0H2 523 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 FRMD4BQ9Y2L6 1034 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 ATP6V1G2O95670 118 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 PPP2R5EQ16537 467 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 TPTE2Q6XPS3 522 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 SLITRK6Q9H5Y7 841 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 ANAPC4Q9UJX5 808 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 NKRFO15226 690 aaKnown RBP eCLIP17.2■□□□□ 0.342e-19■■□□□ 12.9
SLC6A8-201ENST00000253122 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 TNFRSF25Q93038 417 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 PURBQ96QR8 312 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
SLC6A8-201ENST00000253122 DCDC2CA8MYV0 355 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 STXBP3O00186 592 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 THAP12O43422 761 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 SLC16A2P36021 539 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 GRM4Q14833 912 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 MUM1Q2TAK8 710 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 PRR16Q569H4 304 aa17.19■□□□□ 0.34
SLC6A8-201ENST00000253122 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms