RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SIP14410 1827 aa28.19■■■□□ 2.1
LSM7-201ENST00000252622 M0QZ92 97 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 DKC1O60832 514 aaKnown RBP eCLIP28.18■■■□□ 2.1
LSM7-201ENST00000252622 STBD1O95210 358 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 P4HBP07237 508 aaKnown RBP28.18■■■□□ 2.1
LSM7-201ENST00000252622 MCM7P33993 719 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 QARSP47897 775 aaKnown RBP28.18■■■□□ 2.1
LSM7-201ENST00000252622 MKRN4PQ13434 485 aaPredicted RBP28.18■■■□□ 2.1
LSM7-201ENST00000252622 NCAPH2Q6IBW4 605 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 KIAA0319LQ8IZA0 1049 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 NIFKQ9BYG3 293 aaKnown RBP28.18■■■□□ 2.1
LSM7-201ENST00000252622 PCDHA12Q9UN75 941 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 SQORQ9Y6N5 450 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 KDM3AQ9Y4C1 1321 aa28.18■■■□□ 2.1
LSM7-201ENST00000252622 PBX2P40425 430 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 LPIN1Q14693 890 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 TARBP2Q15633 366 aaKnown RBP28.17■■■□□ 2.1
LSM7-201ENST00000252622 FBXO47Q5MNV8 452 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 TTC38Q5R3I4 469 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 TIFAQ96CG3 184 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 IFIH1Q9BYX4 1025 aaKnown RBP28.17■■■□□ 2.1
LSM7-201ENST00000252622 TMEM60Q9H2L4 133 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 TTC12Q9H892 705 aaPredicted RBP28.17■■■□□ 2.1
LSM7-201ENST00000252622 SEPT9Q9UHD8 586 aaPredicted RBP28.17■■■□□ 2.1
LSM7-201ENST00000252622 MSRAQ9UJ68 235 aa28.17■■■□□ 2.1
LSM7-201ENST00000252622 GHRP10912 638 aa28.16■■■□□ 2.1
LSM7-201ENST00000252622 LINC01465Q8N7H1 131 aa28.16■■■□□ 2.1
LSM7-201ENST00000252622 CELF4Q9BZC1 486 aaKnown RBP28.16■■■□□ 2.1
LSM7-201ENST00000252622 PCDHA11Q9Y5I1 949 aa28.16■■■□□ 2.1
LSM7-201ENST00000252622 H3BQV1 296 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 TXKP42681 527 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 TMEM62Q0P6H9 643 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 TSHZ1Q6ZSZ6 1077 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 HERC6Q8IVU3 1022 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 USP38Q8NB14 1042 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 TTYH1Q9H313 450 aaPredicted RBP28.15■■■□□ 2.1
LSM7-201ENST00000252622 MTMR10Q9NXD2 777 aa28.15■■■□□ 2.1
LSM7-201ENST00000252622 DEFB103AP81534 67 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 TBC1D8BQ0IIM8 1120 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 ZNF174Q15697 407 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 C4orf19Q8IY42 314 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 METTL13Q8N6R0 699 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 NEK9Q8TD19 979 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 CEP89Q96ST8 783 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 LXNQ9BS40 222 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 SEMA6BQ9H3T3 888 aa28.14■■■□□ 2.1
LSM7-201ENST00000252622 YBX2Q9Y2T7 364 aaKnown RBP28.14■■■□□ 2.1
LSM7-201ENST00000252622 OR52Z1P0C646 297 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 TMOD1P28289 359 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 RABGGTBP53611 331 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 MTERF2Q49AM1 385 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 ANO5Q75V66 913 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 DYDC2Q96IM9 177 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 WRAP73Q9P2S5 460 aaPredicted RBP28.13■■■□□ 2.09
LSM7-201ENST00000252622 MICAL3Q7RTP6 2002 aa28.13■■■□□ 2.09
LSM7-201ENST00000252622 DDX11L8A8MPP1 907 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 RBAK-RBAKDNI3L0D1 243 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 TOB1P50616 345 aaPredicted RBP28.12■■■□□ 2.09
LSM7-201ENST00000252622 CLCN3P51790 818 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 LARP1BQ659C4 914 aaKnown RBP28.12■■■□□ 2.09
LSM7-201ENST00000252622 MCTP1Q6DN14 999 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 EFCAB12Q6NXP0 572 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 ZNF710Q8N1W2 664 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 MAP7D2Q96T17 732 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 ZSWIM4Q9H7M6 989 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 RGL1Q9NZL6 768 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 PPME1Q9Y570 386 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 GBF1Q92538 1859 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 PTPRSQ13332 1948 aa28.12■■■□□ 2.09
LSM7-201ENST00000252622 TMEM150BA6NC51 233 aa28.11■■■□□ 2.09
LSM7-201ENST00000252622 K7ELQ4 463 aaPredicted RBP28.11■■■□□ 2.09
LSM7-201ENST00000252622 AMHP03971 560 aa28.11■■■□□ 2.09
LSM7-201ENST00000252622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.11■■■□□ 2.09
LSM7-201ENST00000252622 LRRC71Q8N4P6 559 aa28.11■■■□□ 2.09
LSM7-201ENST00000252622 INTS4Q96HW7 963 aaKnown RBP28.11■■■□□ 2.09
LSM7-201ENST00000252622 HSD17B14Q9BPX1 270 aa28.11■■■□□ 2.09
LSM7-201ENST00000252622 EIF2AK1Q9BQI3 630 aaKnown RBP28.11■■■□□ 2.09
LSM7-201ENST00000252622 NKX2-4Q9H2Z4 354 aa28.11■■■□□ 2.09
LSM7-201ENST00000252622 AGO3Q9H9G7 860 aaKnown RBP28.11■■■□□ 2.09
LSM7-201ENST00000252622 IGKV6-21A0A0C4DH24 114 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 SLITRK3O94933 977 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 LYPLA2O95372 231 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 CYP4A11Q02928 519 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 FAM43BQ6ZT52 329 aaPredicted RBP28.1■■■□□ 2.09
LSM7-201ENST00000252622 SNX21Q969T3 373 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 FAM161BQ96MY7 647 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 GUCD1Q96NT3 240 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 ZNF576Q9H609 170 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 CYP26B1Q9NR63 512 aa28.1■■■□□ 2.09
LSM7-201ENST00000252622 EVPLQ92817 2033 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 POTEMA6NI47 508 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 MAFO75444 373 aaPredicted RBP28.09■■■□□ 2.09
LSM7-201ENST00000252622 GJB5O95377 273 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 VTNP04004 478 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 CD52P31358 61 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 CTTNQ14247 550 aaKnown RBP28.09■■■□□ 2.09
LSM7-201ENST00000252622 NBR1Q14596 966 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 RILPL1Q5EBL4 403 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 PLA2G4FQ68DD2 849 aa28.09■■■□□ 2.09
LSM7-201ENST00000252622 C4orf32Q8N8J7 132 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms