RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ANKFY1Q9P2R3 1169 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 HADHQ16836 314 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 BUB1O43683 1085 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 STK10O94804 968 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 H2AFXP16104 143 aaPredicted RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 EIF4A3P38919 411 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 PSMC5P62195 406 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 ABHD10Q9NUJ1 306 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 FAM169AQ9Y6X4 670 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 TULP2O00295 520 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 PSMD14O00487 310 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 NR3C1P04150 777 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.33
SIN3B-201ENST00000248054 CCZ1BP86790 482 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.33
SIN3B-201ENST00000248054 ABCB6Q9NP58 842 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 ASIC3Q9UHC3 531 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.33
SIN3B-201ENST00000248054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.33
SIN3B-201ENST00000248054 KRIT1O00522 736 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 RGPD8O14715 1765 aaPredicted RBP17.08■□□□□ 0.32
SIN3B-201ENST00000248054 RFX1P22670 979 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 KIF11P52732 1056 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 PTPAQ15257 358 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 NTRK3Q16288 839 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.32
SIN3B-201ENST00000248054 PSMB7Q99436 277 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 EIF2AK1Q9BQI3 630 aaKnown RBP17.08■□□□□ 0.32
SIN3B-201ENST00000248054 TADA3O75528 432 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
SIN3B-201ENST00000248054 HSPA6P17066 643 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 MAN1A1P33908 653 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 CASP8Q14790 479 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 DENND2CQ68D51 928 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 ANKS1AQ92625 1134 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 RAB20Q9NX57 234 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PEX19P40855 299 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 RBM43Q6ZSC3 357 aaKnown RBP17.07■□□□□ 0.32
SIN3B-201ENST00000248054 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 SAMD3Q8N6K7 520 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 CASP1P29466 404 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 ADSSL1Q8N142 457 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PBKQ96KB5 322 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 SLC24A3Q9HC58 644 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 LCMT1Q9UIC8 334 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 ATRNO75882 1429 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 P3H4Q92791 437 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 AP5M1Q9H0R1 490 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
SIN3B-201ENST00000248054 TRIM49BA6NDI0 452 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 RASSF2P50749 326 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 TGFB2P61812 414 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 TSNAXIP1Q2TAA8 658 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 CFAP157Q5JU67 520 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 XXYLT1Q8NBI6 393 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
SIN3B-201ENST00000248054 MAP7D1Q3KQU3 841 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 GPIHBP1Q8IV16 184 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 HESX1Q9UBX0 185 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 FOXN1O15353 648 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 CTNND1O60716 968 aaKnown RBP17.06■□□□□ 0.32
SIN3B-201ENST00000248054 DPEP1P16444 411 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 CCDC125Q86Z20 511 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 ACRBPQ8NEB7 543 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 GABPB2Q8TAK5 448 aaPredicted RBP17.06■□□□□ 0.32
SIN3B-201ENST00000248054 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 K7ERI5 159 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 PDXKO00764 312 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 SORBS3O60504 671 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 STAT3P40763 770 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 COG2Q14746 738 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 KRT71Q3SY84 523 aa17.06■□□□□ 0.32
SIN3B-201ENST00000248054 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
SIN3B-201ENST00000248054 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms