RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 LRRC8AQ8IWT6 810 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 MYCT1Q8N699 235 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 CCDC102AQ96A19 550 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 CNOT6LQ96LI5 555 aaKnown RBP15.69■□□□□ 0.1
SDF2-201ENST00000247020 VTA1Q9NP79 307 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 DDX41Q9UJV9 622 aaKnown RBP15.69■□□□□ 0.1
SDF2-201ENST00000247020 N4BP3O15049 544 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
SDF2-201ENST00000247020 COBLO75128 1261 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 HIP1RO75146 1068 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 MARSP56192 900 aaKnown RBP15.68■□□□□ 0.1
SDF2-201ENST00000247020 MAPK7Q13164 816 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
SDF2-201ENST00000247020 IRF5Q13568 498 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 SWSAP1Q6NVH7 229 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 MAMDC4Q6UXC1 1216 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 LRRC55Q6ZSA7 311 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 PLEKHH3Q7Z736 793 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 CCDC60Q8IWA6 550 aaPredicted RBP15.68■□□□□ 0.1
SDF2-201ENST00000247020 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 SMC1BQ8NDV3 1235 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 GLIS3Q8NEA6 775 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 AFAP1L1Q8TED9 768 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 FIZ1Q96SL8 496 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 KCNF1Q9H3M0 494 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 ST6GALNAC4Q9H4F1 302 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 ZNF302Q9NR11 478 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
SDF2-201ENST00000247020 SLC5A4Q9NY91 659 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 TBC1D7Q9P0N9 293 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 PCDHB13Q9Y5F0 798 aa15.68■□□□□ 0.1
SDF2-201ENST00000247020 A0A1W2PQC6 194 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 SLC15A5A6NIM6 579 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 ZNF862O60290 1169 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 ZNF500O60304 480 aaPredicted RBP15.67■□□□□ 0.1
SDF2-201ENST00000247020 DGAT1O75907 488 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 STBD1O95210 358 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 GCNT3O95395 438 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 DNM2P50570 870 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 PRKCEQ02156 737 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 SREBF2Q12772 1141 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 TRIM14Q14142 442 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 TTLL4Q14679 1199 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 CCDC62Q6P9F0 684 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 ANO5Q75V66 913 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 ARMCX2Q7L311 632 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 ZNF720Q7Z2F6 126 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
SDF2-201ENST00000247020 SCFD2Q8WU76 684 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 SEPT1Q8WYJ6 367 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 TUBGCP2Q9BSJ2 902 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 FGFBP2Q9BYJ0 223 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 GPBP1L1Q9HC44 474 aaPredicted RBP15.67■□□□□ 0.1
SDF2-201ENST00000247020 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
SDF2-201ENST00000247020 RBM47A0AV96 593 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 BACH1O14867 736 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 USO1O60763 962 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 GGPS1O95749 300 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 PLS3P13797 630 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDF2-201ENST00000247020 ABCD1P33897 745 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 RTP1P59025 263 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 DAW1Q8N136 415 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 CCDC112Q8NEF3 446 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 MCPH1Q8NEM0 835 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 CACTINQ8WUQ7 758 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 IQCDQ96DY2 449 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 STRA6Q9BX79 667 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 TAB2Q9NYJ8 693 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDF2-201ENST00000247020 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDF2-201ENST00000247020 PPP1R37O75864 691 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 MYBP10242 640 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 SCP2P22307 547 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 MTIF2P46199 727 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 CASP5P51878 434 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 TAF1CQ15572 869 aaPredicted RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 IFNL1Q8IU54 200 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 GOLGA5Q8TBA6 731 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 HVCN1Q96D96 273 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 FAM167AQ96KS9 214 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 CEP170P1Q96L14 293 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 VPS16Q9H269 839 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
SDF2-201ENST00000247020 CGNQ9P2M7 1197 aaKnown RBP15.66■□□□□ 0.1
SDF2-201ENST00000247020 EMSYQ7Z589 1322 aa15.65■□□□□ 0.1
SDF2-201ENST00000247020 CETN3O15182 167 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms