RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 HNRNPDLO14979 420 aaKnown RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 NDUFA10O95299 355 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 NR3C1P04150 777 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 OSBPP22059 807 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 KNOP1Q1ED39 458 aaKnown RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 SYT2Q8N9I0 419 aaPredicted RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 RBM46Q8TBY0 533 aaKnown RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 TMEM143Q96AN5 459 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 SAAL1Q96ER3 474 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 A0A0U1RQJ8 604 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 BUB1O43683 1085 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 TERF1P54274 439 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 SFMBT2Q5VUG0 894 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 ATRIPQ8WXE1 791 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 LENG9Q96B70 501 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 JPH1Q9HDC5 661 aaPredicted RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 TBC1D22BQ9NU19 505 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 ZNF536O15090 1300 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 CTAGE15A4D2H0 777 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 TACC1O75410 805 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 CTAGE8P0CG41 777 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 SRGAP2CP0DJJ0 459 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 BIRC3Q13489 604 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 CTAGE4Q8IX94 777 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 KMT5AQ9NQR1 393 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 ADGRG1Q9Y653 693 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
PCDHB12-201ENST00000239450 OSTNP61366 133 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 EXOC3L4Q17RC7 722 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 MPHOSPH6Q99547 160 aaKnown RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 TRIM10Q9UDY6 481 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 PCDHA10Q9Y5I2 948 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 HERVK_113P62684 666 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ZBED6P86452 979 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 TAF4BQ92750 862 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 NHEJ1Q9H9Q4 299 aaPredicted RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 AGO4Q9HCK5 861 aaKnown RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 SLC9A2Q9UBY0 812 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 MYH8P13535 1937 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 SMCHD1A6NHR9 2005 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 PSMD10O75832 226 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 GGPS1O95749 300 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 FAM193AP78312 1265 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ASIC2Q16515 512 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 CCL15Q16663 113 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 ODF2Q5BJF6 829 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 SNCAIPQ9Y6H5 919 aa12.8□□□□□ -0.36
PCDHB12-201ENST00000239450 IGLV3-22A0A075B6J6 115 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 GNA14O95837 355 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 PLEKP08567 350 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 EIF4A3P38919 411 aaKnown RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 TRIM50Q86XT4 487 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 TXLNBQ8N3L3 684 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 DEPTORQ8TB45 409 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 MMP19Q99542 508 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 PHACTR2O75167 634 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 TUBB4AP04350 444 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 PSAPP07602 524 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 SLC12A3P55017 1021 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 UGCGQ16739 394 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 GJC2Q5T442 439 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 DNAAF5Q86Y56 855 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 SPATC1LQ9H0A9 340 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 WRAP73Q9P2S5 460 aaPredicted RBP12.79□□□□□ -0.36
PCDHB12-201ENST00000239450 PSMC5P62195 406 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms