RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 KNOP1Q1ED39 458 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 XKR9Q5GH70 373 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 KCNV1Q6PIU1 500 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 ADGRA2Q96PE1 1338 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 IGSF9BQ9UPX0 1349 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 IGKV6D-21A0A0A0MT36 114 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 USO1O60763 962 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 GCNT3O95395 438 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 FGFR1OPO95684 399 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 SLC10A3P09131 477 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 ODR4Q5SWX8 454 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 CCDC62Q6P9F0 684 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 OTUD6AQ7L8S5 288 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 GPR142Q7Z601 462 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 MAFBQ9Y5Q3 323 aaPredicted RBP16.82■□□□□ 0.28
HDHD3-201ENST00000238379 IVNS1ABPQ9Y6Y0 642 aa16.82■□□□□ 0.28
HDHD3-201ENST00000238379 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 GSTTP1A0A1W2PQM5 241 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 EIF3DO15371 548 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDHD3-201ENST00000238379 GGPS1O95749 300 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 NMT1P30419 496 aaKnown RBP16.81■□□□□ 0.28
HDHD3-201ENST00000238379 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
HDHD3-201ENST00000238379 ZC3H3Q8IXZ2 948 aaKnown RBP16.81■□□□□ 0.28
HDHD3-201ENST00000238379 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
HDHD3-201ENST00000238379 TUBGCP2Q9BSJ2 902 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 TRAF3IP3Q9Y228 551 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 TLL2Q9Y6L7 1015 aa16.81■□□□□ 0.28
HDHD3-201ENST00000238379 MCM3APO60318 1980 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 NKRFO15226 690 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ATP4AP20648 1035 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 PRKCEQ02156 737 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 GRB14Q14449 540 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 EDRF1Q3B7T1 1238 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 XKR3Q5GH77 459 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ARMCX2Q7L311 632 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 MAEAQ7L5Y9 396 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 FAM155AB1AL88 458 aaPredicted RBP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 PDXKO00764 312 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 KIF3CO14782 793 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 MAPK4P31152 587 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 KCNA1Q09470 495 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ZC2HC1CQ53FD0 456 aaPredicted RBP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 PCYT2Q99447 389 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 STRA6Q9BX79 667 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
HDHD3-201ENST00000238379 CPA4Q9UI42 421 aa16.8■□□□□ 0.28
HDHD3-201ENST00000238379 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
HDHD3-201ENST00000238379 PLS3P13797 630 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDHD3-201ENST00000238379 MTIF2P46199 727 aaKnown RBP16.79■□□□□ 0.28
HDHD3-201ENST00000238379 INHBEP58166 350 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 CCZ1BP86790 482 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 CCZ1P86791 482 aaPredicted RBP16.79■□□□□ 0.28
HDHD3-201ENST00000238379 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 CELF3Q5SZQ8 465 aaKnown RBP16.79■□□□□ 0.28
HDHD3-201ENST00000238379 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 SEPT1Q8WYJ6 367 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 PDLIM7Q9NR12 457 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 ITIH6Q6UXX5 1313 aa16.79■□□□□ 0.28
HDHD3-201ENST00000238379 PLXNA1Q9UIW2 1896 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 PPP1R37O75864 691 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
HDHD3-201ENST00000238379 UBXN1Q04323 297 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
HDHD3-201ENST00000238379 IFNL1Q8IU54 200 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
HDHD3-201ENST00000238379 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
HDHD3-201ENST00000238379 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
HDHD3-201ENST00000238379 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
HDHD3-201ENST00000238379 PRKCSHP14314 528 aaPredicted RBP16.77■□□□□ 0.28
HDHD3-201ENST00000238379 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
HDHD3-201ENST00000238379 DNM2P50570 870 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 ADAM9Q13443 819 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms