RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SLC7A5Q01650 507 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 BIRC3Q13489 604 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 PTGISQ16647 500 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 ZCWPW2Q504Y3 356 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 MEI1Q5TIA1 1274 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 KIAA0895Q8NCT3 520 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 RIN2Q8WYP3 895 aaPredicted RBP6.86□□□□□ -1.31
SGIP1-201ENST00000237247 STAMQ92783 540 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 PPP2R3CQ969Q6 453 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 ATP6V1G3Q96LB4 118 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 NACA2Q9H009 215 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 TMEM60Q9H2L4 133 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 TBC1D7Q9P0N9 293 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 MAD2L2Q9UI95 211 aa6.86□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF189O75820 626 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PPP1R37O75864 691 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 ATP6V1G2O95670 118 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC166P0CW27 439 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 EIF4A3P38919 411 aaKnown RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 LMNB2Q03252 620 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PDE4DQ08499 809 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 TMEM119Q4V9L6 283 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PPP1R15BQ5SWA1 713 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 ATP11CQ8NB49 1132 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 SEC14L1Q92503 715 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 NENFQ9UMX5 172 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 DOCK1Q14185 1865 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 TIMM44O43615 452 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 KRT38O76015 456 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 FAM107AO95990 144 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 LSP1P33241 339 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 HYIQ5T013 277 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 GJC2Q5T442 439 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PPP1R18Q6NYC8 613 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PBKQ96KB5 322 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 ISCUQ9H1K1 167 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 RETREG1Q9H6L5 497 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 TMBIM4Q9HC24 238 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 QPCTLQ9NXS2 382 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 AIPL1Q9NZN9 384 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 CEP104O60308 925 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 MOCS3O95396 460 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 GHRP10912 638 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 FLT3P36888 993 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 MAGEA1P43355 309 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 TNNC1P63316 161 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 ITGB3BPQ13352 177 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC92Q53HC0 331 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 CFAP58Q5T655 872 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 GSPT2Q8IYD1 628 aaKnown RBP6.85□□□□□ -1.31
SGIP1-201ENST00000237247 ACTRT1Q8TDG2 376 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 IWS1Q96ST2 819 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC87Q9NVE4 849 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 DAAM1Q9Y4D1 1078 aa6.85□□□□□ -1.31
SGIP1-201ENST00000237247 MACROD2A1Z1Q3 448 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF233A6NK53 670 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NDUFAB1O14561 156 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ZBTB48P10074 688 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ZFXP17010 805 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 MDH1P40925 334 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 PSMD7P51665 324 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 STK4Q13043 487 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NONOQ15233 471 aaKnown RBP eCLIP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 USH1GQ495M9 461 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 CAVIN4Q5BKX8 364 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ARL8AQ96BM9 186 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 MTMR9Q96QG7 549 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 MLXIPQ9HAP2 919 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NOD2Q9HC29 1040 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 RBM12Q9NTZ6 932 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 FBXL5Q9UKA1 691 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 A0A0A6YYK5 440 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NR1D1P20393 614 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 GNA11P29992 359 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 CTCFP49711 727 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 KLK7P49862 253 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 HDAC4P56524 1084 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 SLC9C1Q4G0N8 1177 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NFRKBQ6P4R8 1299 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 PPP4R3CPQ6ZMV5 832 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 MAATS1Q7Z4T9 603 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 LRRC43Q8N309 656 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ZBTB8BQ8NAP8 495 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF473Q8WTR7 871 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 CENPTQ96BT3 561 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 CALML4Q96GE6 196 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TRAPPC9Q96Q05 1148 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TSG101Q99816 390 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TRAIPQ9BWF2 469 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 UBE2OQ9C0C9 1292 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms