RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SLFN12Q8IYM2 578 aa17■□□□□ 0.31
CTSD-201ENST00000236671 CRYGNQ8WXF5 182 aa17■□□□□ 0.31
CTSD-201ENST00000236671 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
CTSD-201ENST00000236671 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
CTSD-201ENST00000236671 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 FZD9O00144 591 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 RPS6KA1Q15418 735 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 MOXD1Q6UVY6 613 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 KDM7AQ6ZMT4 941 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 PCDHA1Q9Y5I3 950 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 FAM169AQ9Y6X4 670 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 KCNK3O14649 394 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 KIF4AO95239 1232 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 AFPP02771 609 aaKnown RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 PON1P27169 355 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 PSMC6P62333 389 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 KNOP1Q1ED39 458 aaKnown RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 TAF4BQ92750 862 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 COA1Q9GZY4 146 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 EFCC1Q9HA90 598 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
CTSD-201ENST00000236671 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
CTSD-201ENST00000236671 MEIS2O14770 477 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
CTSD-201ENST00000236671 ATP1A2P50993 1020 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 SFR1Q86XK3 245 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 KLHL7Q8IXQ5 586 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 GOLPH3Q9H4A6 298 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 PCDHAC2Q9Y5I4 1007 aa16.98■□□□□ 0.31
CTSD-201ENST00000236671 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 ECHS1P30084 290 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 PRKCIP41743 596 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.313e-14■■■■■ 35
CTSD-201ENST00000236671 EPHA7Q15375 998 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 C1orf131Q8NDD1 294 aaKnown RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 ACTRT1Q8TDG2 376 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 SCFD2Q8WU76 684 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 MEIS1O00470 390 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 PDXKO00764 312 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 AKAP3O75969 853 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 ARHGAP4P98171 946 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 EIF1ADQ8N9N8 165 aaKnown RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.97■□□□□ 0.315e-8■■■■■ 65.3
CTSD-201ENST00000236671 LENG9Q96B70 501 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 PBKQ96KB5 322 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 ISCUQ9H1K1 167 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 DNAJC18Q9H819 358 aa16.97■□□□□ 0.31
CTSD-201ENST00000236671 AJAP1Q9UKB5 411 aaPredicted RBP16.97■□□□□ 0.31
CTSD-201ENST00000236671 ATP8B3O60423 1300 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 BHMG1C9JSJ3 638 aaPredicted RBP16.96■□□□□ 0.31
CTSD-201ENST00000236671 EGFRP00533 1210 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 HLA-DOAP06340 250 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 XRCC5P13010 732 aaKnown RBP16.96■□□□□ 0.31
CTSD-201ENST00000236671 RPA1P27694 616 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 NFIAQ12857 509 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 IFI16Q16666 785 aaKnown RBP16.96■□□□□ 0.31
CTSD-201ENST00000236671 BMT2Q1RMZ1 405 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 PRR16Q569H4 304 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 PODNQ7Z5L7 613 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 ATP6V1G3Q96LB4 118 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 SIX2Q9NPC8 291 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 ASTN1O14525 1302 aa16.96■□□□□ 0.31
CTSD-201ENST00000236671 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.3
CTSD-201ENST00000236671 ZEB2O60315 1214 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 NR1D1P20393 614 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 ANXA13P27216 316 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 SCNN1DP51172 638 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 JAM2P57087 298 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 SHROOM1Q2M3G4 852 aaPredicted RBP16.96■□□□□ 0.3
CTSD-201ENST00000236671 Q4G0T1 1027 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 DACT2Q5SW24 774 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.3
CTSD-201ENST00000236671 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 TPCN2Q8NHX9 752 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 ERMNQ8TAM6 284 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 DNM3Q9UQ16 869 aa16.96■□□□□ 0.3
CTSD-201ENST00000236671 SAMM50Q9Y512 469 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms