RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 ZSWIM2Q8NEG5 633 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 TRIM31Q9BZY9 425 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 OSGEPQ9NPF4 335 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 HOMER2Q9NSB8 354 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 H0YIN7 160 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 GNA14O95837 355 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 MCM3P25205 808 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 SREBF1P36956 1147 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 DPY19L2P1Q6NXN4 242 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 GLYCTKQ8IVS8 523 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 CPXCR1Q8N123 301 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 OR2W6PQ8NHA6 318 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 CASKIN2Q8WXE0 1202 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 SLC35C1Q96A29 364 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 DDX47Q9H0S4 455 aaKnown RBP10.01□□□□□ -0.81
SYDE2-201ENST00000234668 NAGPAQ9UK23 515 aa10.01□□□□□ -0.81
SYDE2-201ENST00000234668 MYH4Q9Y623 1939 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 PPIP5K2O43314 1243 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 AARSP49588 968 aaKnown RBP eCLIP10□□□□□ -0.81
SYDE2-201ENST00000234668 PRPF4BQ13523 1007 aaKnown RBP10□□□□□ -0.81
SYDE2-201ENST00000234668 RPS6KA1Q15418 735 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 CBWD6Q4V339 395 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 CBWD3Q5JTY5 395 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 CBWD5Q5RIA9 395 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 MEI1Q5TIA1 1274 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 TAF3Q5VWG9 929 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 OTOP1Q7RTM1 612 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 TMEM39BQ9GZU3 492 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 ACP6Q9NPH0 428 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 AIPL1Q9NZN9 384 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 SAMM50Q9Y512 469 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 ABCB11O95342 1321 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 MYO1CO00159 1063 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 ZEB2O60315 1214 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 AP3B2Q13367 1082 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 EPHA7Q15375 998 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 TTMPQ5BVD1 217 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 PALB2Q86YC2 1186 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 FAM76AQ8TAV0 307 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 FAM84AQ96KN4 292 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 IDI2Q9BXS1 227 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 PSD3Q9NYI0 1048 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 TAS2R14Q9NYV8 317 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 RRP15Q9Y3B9 282 aaKnown RBP10□□□□□ -0.81
SYDE2-201ENST00000234668 SPATA31A6Q5VVP1 1343 aa10□□□□□ -0.81
SYDE2-201ENST00000234668 NHSQ6T4R5 1651 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 IGLV3-22A0A075B6J6 115 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 DDX3XO00571 662 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 CALUO43852 315 aaPredicted RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 SORBS3O60504 671 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 GAS7O60861 476 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 PRLRP16471 622 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 STAT2P52630 851 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 Q4G0T1 1027 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 ODR4Q5SWX8 454 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EPM2AIP1Q7L775 607 aaPredicted RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 FAM186BQ8IYM0 893 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 RNF10Q8N5U6 811 aaKnown RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 TAF4BQ92750 862 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 HOOK2Q96ED9 719 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 MBOAT7Q96N66 472 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 RUFY1Q96T51 708 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 CELF4Q9BZC1 486 aaKnown RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 VIPAS39Q9H9C1 493 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 SIX2Q9NPC8 291 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 TRAF3IP3Q9Y228 551 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 NR2E1Q9Y466 385 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 RBAK-RBAKDNI3L0D1 243 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 USP8P40818 1118 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 DLG4P78352 724 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 PDCLQ13371 301 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EDRF1Q3B7T1 1238 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 AADACL2Q6P093 401 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 GBP6Q6ZN66 633 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 DAAM2Q86T65 1068 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 METTL13Q8N6R0 699 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 IQCDQ96DY2 449 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 HSD17B14Q9BPX1 270 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 PITPNM2Q9BZ72 1349 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 PDXKO00764 312 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EVI5O60447 810 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 EYA4O95677 639 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 FLT3P36888 993 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 CCT5P48643 541 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 SF3A3Q12874 501 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 FRMD5Q7Z6J6 570 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 SYCP3Q8IZU3 236 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 INPP4AQ96PE3 977 aaPredicted RBP9.99□□□□□ -0.81
SYDE2-201ENST00000234668 UNC45AQ9H3U1 944 aa9.99□□□□□ -0.81
SYDE2-201ENST00000234668 TYW1Q9NV66 732 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms