RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 GUCY2CP25092 1073 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 ZNF75DP51815 510 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 CAP1Q01518 475 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 PRAMEF19Q5SWL8 479 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 TTI2Q6NXR4 508 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 TRIM50Q86XT4 487 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 CCDC43Q96MW1 224 aaKnown RBP20.61■□□□□ 0.89
SNX17-201ENST00000233575 KCND2Q9NZV8 630 aa20.61■□□□□ 0.89
SNX17-201ENST00000233575 SEPT9Q9UHD8 586 aaPredicted RBP20.61■□□□□ 0.89
SNX17-201ENST00000233575 ZHX1Q9UKY1 873 aaPredicted RBP20.61■□□□□ 0.89
SNX17-201ENST00000233575 RBM47A0AV96 593 aaKnown RBP20.6■□□□□ 0.89
SNX17-201ENST00000233575 FAM13AO94988 1023 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 HOXC6P09630 235 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 ARHGAP1Q07960 439 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 ACVR2BQ13705 512 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 ANKRD40Q6AI12 368 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
SNX17-201ENST00000233575 SCFD1Q8WVM8 642 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 P2RX5Q93086 422 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 EEF2KMTQ96G04 330 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 SLC5A4Q9NY91 659 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 COL4A3BPQ9Y5P4 624 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 NOP56O00567 594 aaKnown RBP20.6■□□□□ 0.89
SNX17-201ENST00000233575 ADCY6O43306 1168 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 CCNE1P24864 410 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 FANCCQ00597 558 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 CEP170P1Q96L14 293 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 ABHD16BQ9H3Z7 469 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 GPRC5CQ9NQ84 441 aa20.6■□□□□ 0.89
SNX17-201ENST00000233575 MYBP10242 640 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 CYP2C19P33261 490 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 ZNF131P52739 623 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 MYOCDQ8IZQ8 938 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 DUSP9Q99956 384 aaKnown RBP20.59■□□□□ 0.89
SNX17-201ENST00000233575 GTPBP4Q9BZE4 634 aaKnown RBP20.59■□□□□ 0.89
SNX17-201ENST00000233575 PARVGQ9HBI0 331 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 IFNKQ9P0W0 207 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
SNX17-201ENST00000233575 DKC1O60832 514 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNX17-201ENST00000233575 OATP04181 439 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 SMPD1P17405 629 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 PSMC4P43686 418 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 STAT5BP51692 787 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 TPD52L1Q16890 204 aaPredicted RBP20.58■□□□□ 0.89
SNX17-201ENST00000233575 CDKAL1Q5VV42 579 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 CENPPQ6IPU0 288 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 OTUD6AQ7L8S5 288 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 NELFCDQ8IXH7 590 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 FIZ1Q96SL8 496 aa20.58■□□□□ 0.89
SNX17-201ENST00000233575 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
SNX17-201ENST00000233575 NMT1P30419 496 aaKnown RBP20.58■□□□□ 0.88
SNX17-201ENST00000233575 RGS2P41220 211 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 VEGFBP49765 207 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 SOX10P56693 466 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.88
SNX17-201ENST00000233575 CCDC144BQ3MJ40 725 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 MTERF2Q49AM1 385 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 XKR3Q5GH77 459 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 SOCS4Q8WXH5 440 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 XPO4Q9C0E2 1151 aaKnown RBP20.58■□□□□ 0.88
SNX17-201ENST00000233575 CYP26B1Q9NR63 512 aa20.58■□□□□ 0.88
SNX17-201ENST00000233575 MARK3P27448 753 aa20.57■□□□□ 0.88
SNX17-201ENST00000233575 HOXD13P35453 343 aa20.57■□□□□ 0.88
SNX17-201ENST00000233575 EPM2AIP1Q7L775 607 aaPredicted RBP20.57■□□□□ 0.88
SNX17-201ENST00000233575 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
SNX17-201ENST00000233575 AFAP1L1Q8TED9 768 aa20.57■□□□□ 0.88
SNX17-201ENST00000233575 APBA2Q99767 749 aa20.57■□□□□ 0.88
SNX17-201ENST00000233575 OLFML3Q9NRN5 406 aa20.57■□□□□ 0.88
SNX17-201ENST00000233575 PRPF6O94906 941 aaKnown RBP20.56■□□□□ 0.88
SNX17-201ENST00000233575 GAP43P17677 238 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 CDK11BP21127 795 aaKnown RBP20.56■□□□□ 0.88
SNX17-201ENST00000233575 PPP1R2P41236 205 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 KCNA1Q09470 495 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 ODR4Q5SWX8 454 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 IRF2BP1Q8IU81 584 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 GLG1Q92896 1179 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
SNX17-201ENST00000233575 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 LGR5O75473 907 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 TRPA1O75762 1119 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 GCNT3O95395 438 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 SERPINC1P01008 464 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 GH1P01241 217 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 PTPN21Q16825 1174 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 ZC2HC1CQ53FD0 456 aaPredicted RBP20.56■□□□□ 0.88
SNX17-201ENST00000233575 FAM160B1Q5W0V3 765 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 SPC24Q8NBT2 197 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 AFG1LQ8WV93 481 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 SRRTQ9BXP5 876 aaKnown RBP20.56■□□□□ 0.88
SNX17-201ENST00000233575 AZI2Q9H6S1 392 aa20.56■□□□□ 0.88
SNX17-201ENST00000233575 FCGRTP55899 365 aa20.55■□□□□ 0.88
SNX17-201ENST00000233575 LAMC2Q13753 1193 aa20.55■□□□□ 0.88
SNX17-201ENST00000233575 DUSP28Q4G0W2 176 aa20.55■□□□□ 0.88
SNX17-201ENST00000233575 FAM102BQ5T8I3 360 aa20.55■□□□□ 0.88
SNX17-201ENST00000233575 APTXQ7Z2E3 356 aaKnown RBP20.55■□□□□ 0.88
SNX17-201ENST00000233575 KSR1Q8IVT5 923 aa20.55■□□□□ 0.88
SNX17-201ENST00000233575 CSGALNACT2Q8N6G5 542 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms