RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FAM49AQ9H0Q0 323 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 SMC3Q9UQE7 1217 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 YBX2Q9Y2T7 364 aaKnown RBP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 CDY2AQ9Y6F7 541 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 CDH23Q9H251 3354 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 POTEMA6NI47 508 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 GPR32O75388 356 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 PFKMP08237 780 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 MYOGP15173 224 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 TXKP42681 527 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 TRAPPC10P48553 1259 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 NPEPPSP55786 919 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 DEFB103AP81534 67 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 SMAD3P84022 425 aaKnown RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 TMEM62Q0P6H9 643 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 CTTNQ14247 550 aaKnown RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 CALCRLQ16602 461 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 ECM1Q16610 540 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 FBXO47Q5MNV8 452 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 LARP1BQ659C4 914 aaKnown RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 SLFN12Q8IYM2 578 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 CRIPAKQ8N1N5 446 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 CCDC155Q8N6L0 562 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 LINC01599Q8WXQ3 324 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 EIF2AK1Q9BQI3 630 aaKnown RBP15.44■□□□□ 0.06
VEGFA-201ENST00000230480 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 ADAMTS10Q9H324 1103 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
VEGFA-201ENST00000230480 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 SYT1P21579 422 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 RABGGTBP53611 331 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 WDR5P61964 334 aaKnown RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 PSMC5P62195 406 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 MRPS6P82932 125 aaKnown RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 XKR3Q5GH77 459 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 PLA2G4FQ68DD2 849 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 GPR153Q6NV75 609 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 SPRED2Q7Z698 418 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 C4orf19Q8IY42 314 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 TMX1Q9H3N1 280 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
VEGFA-201ENST00000230480 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-201ENST00000230480 MED24O75448 989 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 LYPLA2O95372 231 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
VEGFA-201ENST00000230480 GHRP10912 638 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 CLCN3P51790 818 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 PTGDRQ13258 359 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 CNKSR3Q6P9H4 555 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 LRRC71Q8N4P6 559 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 LXNQ9BS40 222 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 CELF4Q9BZC1 486 aaKnown RBP15.42■□□□□ 0.06
VEGFA-201ENST00000230480 XPNPEP1Q9NQW7 623 aa15.42■□□□□ 0.06
VEGFA-201ENST00000230480 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 MAFO75444 373 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-201ENST00000230480 PARNO95453 639 aaKnown RBP15.41■□□□□ 0.06
VEGFA-201ENST00000230480 VTNP04004 478 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 OR52Z1P0C646 297 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 TECP42680 631 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 RESTQ13127 1097 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 ORC2Q13416 577 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-201ENST00000230480 EFCAB12Q6NXP0 572 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 CATSPER3Q86XQ3 398 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 CKAP2LQ8IYA6 745 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 FAM167AQ96KS9 214 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 MMTAG2Q9BU76 263 aaKnown RBP15.41■□□□□ 0.06
VEGFA-201ENST00000230480 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
VEGFA-201ENST00000230480 NRBP2Q9NSY0 501 aa15.41■□□□□ 0.06
VEGFA-201ENST00000230480 MGEA5O60502 916 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 BAG4O95429 457 aaKnown RBP15.4■□□□□ 0.06
VEGFA-201ENST00000230480 CD52P31358 61 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
VEGFA-201ENST00000230480 MTERF2Q49AM1 385 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 NME8Q8N427 588 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 IGSF22Q8N9C0 903 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 ZNF668Q96K58 619 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-201ENST00000230480 GUCD1Q96NT3 240 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 SEMA6BQ9H3T3 888 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 DHX33Q9H6R0 707 aaKnown RBP15.4■□□□□ 0.06
VEGFA-201ENST00000230480 ERVK-5Q9HDB9 667 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 CYP26B1Q9NR63 512 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 MTMR10Q9NXD2 777 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 NOC2LQ9Y3T9 749 aaKnown RBP15.4■□□□□ 0.06
VEGFA-201ENST00000230480 TRPV2Q9Y5S1 764 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 TRANK1O15050 2925 aa15.4■□□□□ 0.06
VEGFA-201ENST00000230480 MYO7AQ13402 2215 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms