RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PES1O00541 588 aaKnown RBP22.55■■□□□ 1.2
SNX3-201ENST00000230085 FSBPO95073 299 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 OR52Z1P0C646 297 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 SMARCA1P28370 1054 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 KLK7P49862 253 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 GNGT1P63211 74 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 TTMPQ5BVD1 217 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 RPAINQ86UA6 219 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 C3orf20Q8ND61 904 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 HDAC7Q8WUI4 952 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 NDST4Q9H3R1 872 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 RPAP3Q9H6T3 665 aaPredicted RBP22.55■■□□□ 1.2
SNX3-201ENST00000230085 ATP8B3O60423 1300 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 PDHXO00330 501 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 CFAP221Q4G0U5 840 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 FAM83BQ5T0W9 1011 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 TYW1BQ6NUM6 668 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 ANKRD23Q86SG2 305 aa22.55■■□□□ 1.2
SNX3-201ENST00000230085 PDHBP11177 359 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 EIF4A3P38919 411 aaKnown RBP22.54■■□□□ 1.2
SNX3-201ENST00000230085 SLC1A4P43007 532 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 PAK2Q13177 524 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 C8orf74Q6P047 294 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 REM2Q8IYK8 340 aaPredicted RBP22.54■■□□□ 1.2
SNX3-201ENST00000230085 PRPF38AQ8NAV1 312 aaKnown RBP22.54■■□□□ 1.2
SNX3-201ENST00000230085 KIAA0895Q8NCT3 520 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 WHAMMQ8TF30 809 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 NOX5Q96PH1 765 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 RUFY1Q96T51 708 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 SEMA6BQ9H3T3 888 aa22.54■■□□□ 1.2
SNX3-201ENST00000230085 PP2D1A8MPX8 630 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 WDR46O15213 610 aaKnown RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 IRX3P78415 501 aaPredicted RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 PDE4CQ08493 712 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 KLHDC7AQ5VTJ3 777 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 PDXDC1Q6P996 788 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 UNC13DQ70J99 1090 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 TSEN2Q8NCE0 465 aaKnown RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 RASSF8Q8NHQ8 419 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 RRP36Q96EU6 259 aaKnown RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 NCAPGQ9BPX3 1015 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 SPZ1Q9BXG8 430 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 LUC7LQ9NQ29 371 aaKnown RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 THSD7BQ9C0I4 1608 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 PALM3A6NDB9 673 aaPredicted RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 MOCS3O95396 460 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 MAGEA1P43355 309 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 PSMD2Q13200 908 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 PLCB4Q15147 1175 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 CCDC181Q5TID7 509 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 KCTD1Q719H9 257 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 MICALL1Q8N3F8 863 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 GMCL1Q96IK5 515 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 TACO1Q9BSH4 297 aaKnown RBP22.53■■□□□ 1.2
SNX3-201ENST00000230085 TANGO6Q9C0B7 1094 aa22.53■■□□□ 1.2
SNX3-201ENST00000230085 ESYT2A0FGR8 921 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 BTNL10A8MVZ5 291 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 CYP2C8P10632 490 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 BMP3P12645 472 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 ASIC1P78348 528 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 EHHADHQ08426 723 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 CATSPERGQ6ZRH7 1159 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 MICALCLQ6ZW33 695 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 ZIM3Q96PE6 472 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 MLXIPQ9HAP2 919 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 RIC8AQ9NPQ8 531 aa22.52■■□□□ 1.2
SNX3-201ENST00000230085 FRMPD2Q68DX3 1309 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L15C9J2P7 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L13C9JLJ4 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 BHMG1C9JSJ3 638 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L11C9JVI0 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L18D6R9N7 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L22D6RA61 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L17D6RBQ6 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L19D6RCP7 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L20D6RJB6 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 AKR1B10O60218 316 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 PLEKP08567 350 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 SNHG28P0DPA3 235 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 MYBP10242 640 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 FNTAP49354 379 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 USP17L24Q0WX57 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 DRP2Q13474 957 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 INF2Q27J81 1249 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 HGSNATQ68CP4 663 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 NFRKBQ6P4R8 1299 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 KAT2BQ92831 832 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 ZFP91Q96JP5 570 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 PCMTD1Q96MG8 357 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 GDAP1L1Q96MZ0 367 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 LRRC27Q9C0I9 530 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 ASCC2Q9H1I8 757 aaPredicted RBP22.51■■□□□ 1.19
SNX3-201ENST00000230085 EPN3Q9H201 632 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 PLEKHA4Q9H4M7 779 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 PCDHGC5Q9Y5F6 944 aa22.51■■□□□ 1.19
SNX3-201ENST00000230085 HMGB1P1B2RPK0 211 aaPredicted RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 GOLGA8HP0CJ92 632 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 GSCP56915 257 aaPredicted RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 LRIG3Q6UXM1 1119 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms