RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ZBTB48P10074 688 aaPredicted RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 TAL1P17542 331 aaPredicted RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 MAGEA9P43362 315 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 GUCY2FP51841 1108 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 TCERG1LQ5VWI1 586 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 CD302Q8IX05 232 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 SEPT12Q8IYM1 358 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 GOLPH3Q9H4A6 298 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 BCAS3Q9H6U6 928 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 GCNT4Q9P109 453 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 ZNF646O15015 1829 aaPredicted RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 TRADDQ15628 312 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 DNAAF5Q86Y56 855 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 KLHL7Q8IXQ5 586 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 ACTRT1Q8TDG2 376 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 EIF2AK1Q9BQI3 630 aaKnown RBP17.78■□□□□ 0.44
LTBR-201ENST00000228918 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 OLFML3Q9NRN5 406 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 EP400Q96L91 3159 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
LTBR-201ENST00000228918 EML1O00423 815 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 GDF11O95390 407 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 ICE2Q659A1 982 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 KIAA0825Q8IV33 1275 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 SH2D3CQ8N5H7 860 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 TPCN2Q8NHX9 752 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 SCFD2Q8WU76 684 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 DBNDD1Q9H9R9 158 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 SCN9AQ15858 1988 aa17.78■□□□□ 0.44
LTBR-201ENST00000228918 RBBP6Q7Z6E9 1792 aaKnown RBP17.77■□□□□ 0.44
LTBR-201ENST00000228918 ZMYM2Q9UBW7 1377 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 CLIC2O15247 247 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 CYP3A4P08684 503 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 CCT5P48643 541 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 KCNA1Q09470 495 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 IKQ13123 557 aaPredicted RBP17.77■□□□□ 0.44
LTBR-201ENST00000228918 PODNQ7Z5L7 613 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 EIF1ADQ8N9N8 165 aaKnown RBP17.77■□□□□ 0.44
LTBR-201ENST00000228918 CYP2W1Q8TAV3 490 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 BCAS4Q8TDM0 211 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.77■□□□□ 0.44
LTBR-201ENST00000228918 BORCS6Q96GS4 357 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 MRIQ9BWK5 157 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 ISCUQ9H1K1 167 aa17.77■□□□□ 0.44
LTBR-201ENST00000228918 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 A0A0A6YYK5 440 aaPredicted RBP17.77■□□□□ 0.43
LTBR-201ENST00000228918 A6NNZ2 444 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 ANKRD65E5RJM6 399 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 TGFB1I1O43294 461 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 GAP43P17677 238 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.43
LTBR-201ENST00000228918 HSPA9P38646 679 aaKnown RBP17.77■□□□□ 0.43
LTBR-201ENST00000228918 ERVK-9P63128 1117 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 ABCB5Q2M3G0 1257 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 TUBB8Q3ZCM7 444 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 VPS36Q86VN1 386 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 KCTD17Q8N5Z5 321 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 CALR3Q96L12 384 aaKnown RBP17.77■□□□□ 0.43
LTBR-201ENST00000228918 TAF1DQ9H5J8 278 aaPredicted RBP17.77■□□□□ 0.43
LTBR-201ENST00000228918 POLD4Q9HCU8 107 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 RGL1Q9NZL6 768 aa17.77■□□□□ 0.43
LTBR-201ENST00000228918 IGLV3-22A0A075B6J6 115 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 CEP104O60308 925 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 ECHS1P30084 290 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 KCTD16Q68DU8 428 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 TTC19Q6DKK2 380 aaPredicted RBP17.76■□□□□ 0.43
LTBR-201ENST00000228918 RINT1Q6NUQ1 792 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 GJB7Q6PEY0 223 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 KDM7AQ6ZMT4 941 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 PCDHB13Q9Y5F0 798 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
LTBR-201ENST00000228918 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 BHMG1C9JSJ3 638 aaPredicted RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 PGRMC1O00264 195 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 DDX3XO00571 662 aaKnown RBP eCLIP17.75■□□□□ 0.432e-29■■■■■ 28.3
LTBR-201ENST00000228918 EIF3DO15371 548 aaKnown RBP eCLIP17.75■□□□□ 0.43
LTBR-201ENST00000228918 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 H2AFZP0C0S5 128 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 BMP3P12645 472 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 SKIDA1Q1XH10 827 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 H2AFVQ71UI9 128 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 METTL13Q8N6R0 699 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 C1orf131Q8NDD1 294 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 GEMIN8Q9NWZ8 242 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 INTUQ9ULD6 942 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 STXBP5LQ9Y2K9 1186 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 NOC2LQ9Y3T9 749 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 FERP16591 822 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 POLD1P28340 1107 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 ZNF76P36508 570 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
LTBR-201ENST00000228918 PDCLQ13371 301 aa17.75■□□□□ 0.43
LTBR-201ENST00000228918 NFIL3Q16649 462 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms