RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
NFKB1-201ENST00000226574 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
NFKB1-201ENST00000226574 GLE1Q53GS7 698 aaKnown RBP14.86□□□□□ -0.03
NFKB1-201ENST00000226574 TTI2Q6NXR4 508 aa14.86□□□□□ -0.03
NFKB1-201ENST00000226574 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
NFKB1-201ENST00000226574 NLRX1Q86UT6 975 aa14.86□□□□□ -0.03
NFKB1-201ENST00000226574 EXOC7Q9UPT5 735 aa14.86□□□□□ -0.03
NFKB1-201ENST00000226574 GOLGA8MH3BSY2 632 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 TOM1O60784 492 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 GH2P01242 217 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CORO7P57737 925 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 PTK2Q05397 1052 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 RCN2Q14257 317 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 PPP2R5EQ16537 467 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CROCCP2Q86T23 111 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 LRRC8CQ8TDW0 803 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 MXD3Q9BW11 206 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 DBR1Q9UK59 544 aaKnown RBP14.85□□□□□ -0.03
NFKB1-201ENST00000226574 GLI1P08151 1106 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CA4P22748 312 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 PEX3P56589 373 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 SEC23AQ15436 765 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CCDC110Q8TBZ0 833 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.85□□□□□ -0.034e-6■■□□□ 11.8
NFKB1-201ENST00000226574 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 MYBL2P10244 700 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 BMP3P12645 472 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 BFSP1Q12934 665 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.85□□□□□ -0.03
NFKB1-201ENST00000226574 MTMR8Q96EF0 704 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 VIPAS39Q9H9C1 493 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 KLC4Q9NSK0 619 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CCPG1Q9ULG6 757 aa14.85□□□□□ -0.03
NFKB1-201ENST00000226574 CCDC188H7C350 402 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 STXBP3O00186 592 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 ZBTB5O15062 677 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 LIG4P49917 911 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 GALCP54803 685 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 DLGAP5Q15398 846 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 TSNAXIP1Q2TAA8 658 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 CD248Q9HCU0 757 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 PDS5AQ29RF7 1337 aaKnown RBP14.84□□□□□ -0.03
NFKB1-201ENST00000226574 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 ARHGAP42A6NI28 874 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 PPIP5K2O43314 1243 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 SLC37A4O43826 429 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 UCHL3P15374 230 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 CD58P19256 250 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 SMAD1Q15797 465 aaKnown RBP14.84□□□□□ -0.03
NFKB1-201ENST00000226574 ZC2HC1CQ53FD0 456 aaPredicted RBP14.84□□□□□ -0.03
NFKB1-201ENST00000226574 CHURC1Q8WUH1 139 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 RSAD2Q8WXG1 361 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 PSD3Q9NYI0 1048 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 GJA3Q9Y6H8 435 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 SGK1O00141 431 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 EIF2AK2P19525 551 aaKnown RBP14.84□□□□□ -0.03
NFKB1-201ENST00000226574 IRX4P78413 519 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 MDM2Q00987 491 aaPredicted RBP14.84□□□□□ -0.03
NFKB1-201ENST00000226574 CFAP157Q5JU67 520 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 ANAPC7Q9UJX3 599 aa14.84□□□□□ -0.03
NFKB1-201ENST00000226574 HNRNPH1P31943 449 aaKnown RBP14.83□□□□□ -0.03
NFKB1-201ENST00000226574 CFAP61Q8NHU2 1237 aa14.83□□□□□ -0.03
NFKB1-201ENST00000226574 NKX2-3Q8TAU0 364 aa14.83□□□□□ -0.03
NFKB1-201ENST00000226574 RUNDC3BQ96NL0 473 aa14.83□□□□□ -0.03
NFKB1-201ENST00000226574 SEMA6BQ9H3T3 888 aa14.83□□□□□ -0.03
NFKB1-201ENST00000226574 ARHGEF28Q8N1W1 1705 aaKnown RBP14.83□□□□□ -0.03
NFKB1-201ENST00000226574 RCCD1A6NED2 376 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 FOSP01100 380 aaPredicted RBP14.83□□□□□ -0.04
NFKB1-201ENST00000226574 ARL1P40616 181 aaPredicted RBP14.83□□□□□ -0.04
NFKB1-201ENST00000226574 IL17RAQ96F46 866 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 DYDC2Q96IM9 177 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 TPX2Q9ULW0 747 aaKnown RBP14.83□□□□□ -0.04
NFKB1-201ENST00000226574 TTLL3Q9Y4R7 772 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 EXOC1LA0A1B0GW35 172 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 FAM153BP0C7A2 387 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 PMS2P54278 862 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 FAM153CQ494X1 144 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 ANKS1AQ92625 1134 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 RNF25Q96BH1 459 aaPredicted RBP14.83□□□□□ -0.04
NFKB1-201ENST00000226574 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.04
NFKB1-201ENST00000226574 RAB20Q9NX57 234 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 FAM153AQ9UHL3 310 aa14.83□□□□□ -0.04
NFKB1-201ENST00000226574 ATMINO43313 823 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 TROVE2P10155 538 aaKnown RBP eCLIP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 RASA1P20936 1047 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 OSTNP61366 133 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 YWHAGP61981 247 aaKnown RBP eCLIP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 SARNPP82979 210 aaKnown RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 SDCCAG8Q86SQ7 713 aaPredicted RBP14.82□□□□□ -0.04
NFKB1-201ENST00000226574 PROM2Q8N271 834 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 GLIS3Q8NEA6 775 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 SLC30A5Q8TAD4 765 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 EPN3Q9H201 632 aa14.82□□□□□ -0.04
NFKB1-201ENST00000226574 DCTN4Q9UJW0 460 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms