RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.281e-9■■■■■ 27.2
VTN-201ENST00000226218 NCANO14594 1321 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CETN3O15182 167 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 DDX3YO15523 660 aaKnown RBP16.83■□□□□ 0.28
VTN-201ENST00000226218 H2AFZP0C0S5 128 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CHN1P15882 459 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CYP11B2P19099 503 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 PTENP60484 403 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CRYMQ14894 314 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 FOCADQ5VW36 1801 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 H2AFVQ71UI9 128 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 SPAG5Q96R06 1193 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 NT5C3AQ9H0P0 336 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 CCDC134Q9H6E4 229 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 NOD2Q9HC29 1040 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 BMP2KQ9NSY1 1161 aaPredicted RBP16.83■□□□□ 0.28
VTN-201ENST00000226218 TRAF3IP3Q9Y228 551 aa16.83■□□□□ 0.28
VTN-201ENST00000226218 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.83■□□□□ 0.28
VTN-201ENST00000226218 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 SHBGP04278 402 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 NR2F2P24468 414 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 EPS15P42566 896 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 RIPK1Q13546 671 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 E2F5Q15329 346 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 DCAF12L1Q5VU92 463 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 HOOK3Q86VS8 718 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 ATP2C2O75185 946 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 LDHBP07195 334 aaKnown RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 PPATQ06203 517 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 KLRC3Q07444 240 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 MAPKAPK5Q8IW41 473 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 SLC30A5Q8TAD4 765 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 GJA10Q969M2 543 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 RAB17Q9H0T7 212 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 EBF2Q9HAK2 575 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
VTN-201ENST00000226218 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
VTN-201ENST00000226218 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 SLC26A4O43511 780 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 RTN2O75298 545 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 BAG3O95817 575 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 HOXD13P35453 343 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 ARSHQ5FYA8 562 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 ZDHHC24Q6UX98 284 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 CRELD2Q6UXH1 353 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 CUL5Q93034 780 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 RTFDC1Q9BY42 306 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 SLAIN2Q9P270 581 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 ZNF831Q5JPB2 1677 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 CCDC189A1A4V9 331 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 FGGP02679 453 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 MMEP08473 750 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 CASP5P51878 434 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 EPM2AIP1Q7L775 607 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 DAAM2Q86T65 1068 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 WDR66Q8TBY9 1149 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 RNF25Q96BH1 459 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 ERP44Q9BS26 406 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 KIAA1024Q9UPX6 916 aa16.81■□□□□ 0.28
VTN-201ENST00000226218 DIS3Q9Y2L1 958 aaKnown RBP16.81■□□□□ 0.28
VTN-201ENST00000226218 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 AFF2P51816 1311 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 GFPT2O94808 682 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 TNNI2P48788 182 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 GSTO1P78417 241 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 TNFAIP8L3Q5GJ75 292 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 HIBCHQ6NVY1 386 aaPredicted RBP16.8■□□□□ 0.28
VTN-201ENST00000226218 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 LRRC34Q8IZ02 419 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
VTN-201ENST00000226218 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
VTN-201ENST00000226218 POTEB3A0JP26 581 aa16.79■□□□□ 0.28
VTN-201ENST00000226218 POTECB2RU33 542 aa16.79■□□□□ 0.28
VTN-201ENST00000226218 GALCP54803 685 aa16.79■□□□□ 0.28
VTN-201ENST00000226218 DRG2P55039 364 aaKnown RBP16.79■□□□□ 0.28
VTN-201ENST00000226218 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
VTN-201ENST00000226218 ACCSLQ4AC99 568 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms