RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 JAM2P57087 298 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ARID5AQ03989 594 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 PTK2Q05397 1052 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 FMNL3Q8IVF7 1028 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 IFT20Q8IY31 132 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 SPICE1Q8N0Z3 855 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 AFAP1L1Q8TED9 768 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 DEFB129Q9H1M3 183 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 PARVGQ9HBI0 331 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ZNF219Q9P2Y4 722 aaPredicted RBP24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ODF2LQ9ULJ1 636 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 FRMPD4Q14CM0 1322 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 RGPD3A6NKT7 1758 aaPredicted RBP24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 RGPD4Q7Z3J3 1758 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 PPIP5K2O43314 1243 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 CFBP00751 764 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 FERP16591 822 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ZNF131P52739 623 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ZSCAN26Q16670 478 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 DCAF17Q5H9S7 520 aaPredicted RBP24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 FKBP1CQ5VVH2 108 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ZNF571Q7Z3V5 609 aaPredicted RBP24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 MYCT1Q8N699 235 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 TAF4BQ92750 862 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 DYDC2Q96IM9 177 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 SIX2Q9NPC8 291 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 RBM12Q9NTZ6 932 aaKnown RBP24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 ZBTB21Q9ULJ3 1066 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 NENFQ9UMX5 172 aa24.05■■□□□ 1.44
SMARCD2-201ENST00000225742 SHTN1A0MZ66 631 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 GOLGA6BA6NDN3 693 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 YDJCA8MPS7 323 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 TGFB1I1O43294 461 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 TBC1D12O60347 775 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 GAS7O60861 476 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 IVLP07476 585 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 ECE1P42892 770 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 CTTNQ14247 550 aaKnown RBP24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 EZH2Q15910 746 aaKnown RBP24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 CEP55Q53EZ4 464 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 ALS2CLQ60I27 953 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 RSBN1LQ6PCB5 846 aaPredicted RBP24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 TPH2Q8IWU9 490 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 NEK9Q8TD19 979 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 PBKQ96KB5 322 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 FAM204AQ9H8W3 233 aa24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 RBBP6Q7Z6E9 1792 aaKnown RBP24.04■■□□□ 1.44
SMARCD2-201ENST00000225742 A0A0A6YYK5 440 aaPredicted RBP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 CAPN2P17655 700 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 CHRNA5P30532 468 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 MATR3P43243 847 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 SND1Q7KZF4 910 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 ACER1Q8TDN7 264 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 HDAC7Q8WUI4 952 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 LMBR1Q8WVP7 490 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 PSMB7Q99436 277 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 VCPKMTQ9H867 229 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 ZNF70Q9UC06 446 aaPredicted RBP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 NAGPAQ9UK23 515 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 FEM1BQ9UK73 627 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 TCERG1LQ5VWI1 586 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 FAM186BQ8IYM0 893 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 INPP4AQ96PE3 977 aaPredicted RBP24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 GDF3Q9NR23 364 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 GCNT4Q9P109 453 aa24.03■■□□□ 1.44
SMARCD2-201ENST00000225742 ZMYM2Q9UBW7 1377 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 TCP10L2B9ZVM9 353 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 OPA1O60313 960 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 TAL1P17542 331 aaPredicted RBP24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 GGCXP38435 758 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 CASP4P49662 377 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 MYBPC2Q14324 1141 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 RPS6KA1Q15418 735 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 KIAA1755Q5JYT7 1200 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 GSPT2Q8IYD1 628 aaKnown RBP24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 TEKT3Q9BXF9 490 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 PACSIN1Q9BY11 444 aa24.02■■□□□ 1.44
SMARCD2-201ENST00000225742 AGPSO00116 658 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 FTCDO95954 541 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 STAT1P42224 750 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 NPEPPSP55786 919 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 DLGAP5Q15398 846 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 ALKBH5Q6P6C2 394 aaKnown RBP24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 HS2ST1Q7LGA3 356 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 ZNF720Q7Z2F6 126 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 PIGOQ8TEQ8 1089 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 RIT2Q99578 217 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 PCDHB13Q9Y5F0 798 aa24.01■■□□□ 1.43
SMARCD2-201ENST00000225742 GOLGA8KD6RF30 607 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 PHACTR2O75167 634 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 GUCY2CP25092 1073 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 TNNC1P63316 161 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 PPP2R5AQ15172 486 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 SPDYE2Q495Y8 402 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 CCDC174Q6PII3 467 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 B3GNT9Q6UX72 402 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 RBM46Q8TBY0 533 aaKnown RBP24■■□□□ 1.43
SMARCD2-201ENST00000225742 MS4A14Q96JA4 679 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms