RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 H3BRB1 525 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 HBP1O60381 514 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 MYL3P08590 195 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 ZNF286BP0CG31 522 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 ASIC1P78348 528 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 BEX3Q00994 111 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 PLCB4Q15147 1175 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 PLA2G4FQ68DD2 849 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 RINT1Q6NUQ1 792 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 CNNM4Q6P4Q7 775 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 PADI6Q6TGC4 694 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 DDX12PQ92771 950 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 C16orf70Q9BSU1 422 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
CHMP5-201ENST00000223500 RMND1Q9NWS8 449 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 TRPC6Q9Y210 931 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 PCDHA5Q9Y5H7 936 aa18.42■□□□□ 0.54
CHMP5-201ENST00000223500 ARID2Q68CP9 1835 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 SYCE3A1L190 88 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 PGK1P00558 417 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 MTERF2Q49AM1 385 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 RNF180Q86T96 592 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 ERCC4Q92889 916 aaPredicted RBP18.41■□□□□ 0.54
CHMP5-201ENST00000223500 GSDMAQ96QA5 445 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 TIPINQ9BVW5 301 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 KATNAL1Q9BW62 490 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHMP5-201ENST00000223500 CYP26B1Q9NR63 512 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 TUBE1Q9UJT0 475 aa18.41■□□□□ 0.54
CHMP5-201ENST00000223500 MYH11P35749 1972 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 TMEM150BA6NC51 233 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 ADAMTS4O75173 837 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 RPN1P04843 607 aaKnown RBP18.4■□□□□ 0.54
CHMP5-201ENST00000223500 CASP1P29466 404 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 NPEPPSP55786 919 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 ARSHQ5FYA8 562 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 NT5DC1Q5TFE4 455 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 C1orf186Q6ZWK4 172 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 CCDC65Q8IXS2 484 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 EXOC8Q8IYI6 725 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 PCSK9Q8NBP7 692 aaKnown RBP18.4■□□□□ 0.54
CHMP5-201ENST00000223500 SPATA20Q8TB22 786 aa18.4■□□□□ 0.54
CHMP5-201ENST00000223500 PVALEFA0A1B0GWK0 134 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 USO1O60763 962 aaKnown RBP18.39■□□□□ 0.54
CHMP5-201ENST00000223500 DGAT1O75907 488 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 F2P00734 622 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 IDEP14735 1019 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 GUCY2CP25092 1073 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 CST5P28325 142 aaPredicted RBP18.39■□□□□ 0.54
CHMP5-201ENST00000223500 RFC5P40937 340 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 SARSP49591 514 aaKnown RBP18.39■□□□□ 0.54
CHMP5-201ENST00000223500 ZNF484Q5JVG2 852 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 UNC13DQ70J99 1090 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 KLHDC9Q8NEP7 349 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 DNAJC19Q96DA6 116 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 MTG1Q9BT17 334 aaPredicted RBP18.39■□□□□ 0.54
CHMP5-201ENST00000223500 RUSC1Q9BVN2 902 aa18.39■□□□□ 0.54
CHMP5-201ENST00000223500 GTPBP4Q9BZE4 634 aaKnown RBP18.39■□□□□ 0.54
CHMP5-201ENST00000223500 MYADML2A6NDP7 307 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 TBCAO75347 108 aaKnown RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 CCDC192P0DO97 292 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 PSEN2P49810 448 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 POLGP54098 1239 aaPredicted RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 IRX5P78411 483 aaPredicted RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 GIT2Q14161 759 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 KCNB1Q14721 858 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 TARBP2Q15633 366 aaKnown RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 TRIML1Q8N9V2 468 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 ARRDC4Q8NCT1 418 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 MCPH1Q8NEM0 835 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.53
CHMP5-201ENST00000223500 SH2D3AQ9BRG2 576 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 UNC93B1Q9H1C4 597 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 RNPEPQ9H4A4 650 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 ATP6V0A4Q9HBG4 840 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 EXOC1Q9NV70 894 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 ODF2LQ9ULJ1 636 aa18.39■□□□□ 0.53
CHMP5-201ENST00000223500 COL1A2P08123 1366 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 FAM13AO94988 1023 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 PURAQ00577 322 aaKnown RBP18.38■□□□□ 0.53
CHMP5-201ENST00000223500 RAD51AP2Q09MP3 1159 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 MFSD10Q14728 455 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 LHX8Q68G74 356 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 ZHX3Q9H4I2 956 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 PANK4Q9NVE7 773 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 MAN1B1Q9UKM7 699 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 COL4A3BPQ9Y5P4 624 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 FRMPD3Q5JV73 1810 aa18.38■□□□□ 0.53
CHMP5-201ENST00000223500 NPHP3-ACAD11A0A0J9YXS1 232 aa18.37■□□□□ 0.53
CHMP5-201ENST00000223500 RRN3P2A6NIE6 340 aa18.37■□□□□ 0.53
CHMP5-201ENST00000223500 BIN1O00499 593 aa18.37■□□□□ 0.53
CHMP5-201ENST00000223500 KLRC4O43908 158 aa18.37■□□□□ 0.53
CHMP5-201ENST00000223500 CCL5P13501 91 aa18.37■□□□□ 0.53
CHMP5-201ENST00000223500 INSRRP14616 1297 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms