RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 H2AFVQ71UI9 128 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 ZBTB33Q86T24 672 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 NLRP4Q96MN2 994 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 IRF6O14896 467 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 MSH4O15457 936 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
CHPF2-201ENST00000035307 KRT19P08727 400 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 SMTNP53814 917 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 BACE1P56817 501 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 KRT71Q3SY84 523 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 IFT20Q8IY31 132 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 DUSP10Q9Y6W6 482 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
CHPF2-201ENST00000035307 MED24O75448 989 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 CSPG5O95196 566 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 NR3C2P08235 984 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 CD19P15391 556 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
CHPF2-201ENST00000035307 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
CHPF2-201ENST00000035307 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 EHD2Q9NZN4 543 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 LAD1O00515 517 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 COASYQ13057 564 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 A0A1B0GTH6 734 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 TRIM49P0CI25 452 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 TRIM49CP0CI26 452 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 BMP6P22004 513 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 VGLL4Q14135 290 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 CASP8Q14790 479 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 NR1I3Q14994 352 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 RAD54LQ92698 747 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 KCNH7Q9NS40 1196 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 DNAJC17Q9NVM6 304 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 KLRG2A4D1S0 409 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
CHPF2-201ENST00000035307 ACTN1P12814 892 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 GNGT1P63211 74 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 IL31RAQ8NI17 732 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 POMGNT1Q8WZA1 660 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 EHD4Q9H223 541 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 THAP9Q9H5L6 903 aa13.13□□□□□ -0.31
CHPF2-201ENST00000035307 TADA3O75528 432 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 VSNL1P62760 191 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 UAP1Q16222 522 aaPredicted RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 OTUD6BQ8N6M0 293 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 NOA1Q8NC60 698 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 C7orf43Q8WVR3 580 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 IKZF4Q9H2S9 585 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 KCNA3P22001 575 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 RPS12P25398 132 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 SEL1L2Q5TEA6 688 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 RNF40O75150 1001 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 IFNB1P01574 187 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 NYAP1Q6ZVC0 841 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
CHPF2-201ENST00000035307 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 CUEDC2Q9H467 287 aa13.12□□□□□ -0.31
CHPF2-201ENST00000035307 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
CHPF2-201ENST00000035307 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms