RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Pex3Q9QXY9 372 aa17.98■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Msl3Q9WVG9 525 aa17.98■□□□□ 0.47
Tpm1-215ENSMUST00000113705 GclmO09172 274 aaKnown RBP17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Psmc2P46471 433 aa17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Cdca2Q14B71 982 aaKnown RBP17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 MaeaQ4VC33 396 aa17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Trpc6Q61143 930 aa17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Gm5591Q8CDK1 855 aa17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Adgrg3Q8R0T6 542 aa17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Rpn1Q91YQ5 608 aaKnown RBP17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Rbm10Q99KG3 930 aaKnown RBP17.97■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Tmem240B2RWJ3 173 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Tulp2P46686 562 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Setd4P58467 439 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Hhla1Q3TYV2 514 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Syce2Q505B8 171 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Csrnp2Q8BGQ2 534 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 EtnpplQ8BWU8 499 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Slc15a5Q8CBB2 566 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Mettl24Q8CCB5 363 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Krt23Q99PS0 422 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Akap17bA2A3V1 959 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Pramel3A2AHA7 463 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Gm7903A2AWL1 463 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Ttll6A4Q9E8 822 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Rnaseh1O70338 285 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Gp6P0C191 313 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Gnrh1P13562 90 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Tmod1P49813 359 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Snx27Q3UHD6 539 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Spdye4aQ5IBH6 268 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 F13a1Q8BH61 732 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 PisdQ8BSF4 406 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Emc2Q9CRD2 297 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Scrn1Q9CZC8 414 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Ttc9bQ9D6E4 239 aa17.96■□□□□ 0.47
Tpm1-215ENSMUST00000113705 Gm3164L7N2B9 238 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Gm3264L7N2C5 238 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Diaph1O08808 1255 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Nr1i2O54915 431 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 IppP28575 584 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ppp1r13bQ62415 1087 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ift122Q6NWV3 1182 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Usp49Q6P9L4 685 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Acot5Q6Q2Z6 421 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Celf6Q7TN33 460 aaKnown RBP17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Crb2Q80YA8 1282 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Rp1l1Q8CGM2 1859 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Cabp7Q91ZM8 215 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Dqx1Q924H9 718 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 GhdcQ99J23 532 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 TtpalQ9D3D0 343 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Slc5a4aQ9ET37 656 aa17.95■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ptchd4B9EKX1 904 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 SprtnG3X912 497 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 MafP54843 370 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Echdc2Q3TLP5 296 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Exoc3Q6KAR6 755 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Celf4Q7TSY6 486 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Gtf2a2Q80ZM7 109 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 MylipQ8BM54 445 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ccdc113Q8C5T8 377 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Mcoln1Q99J21 580 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Zfp64Q99KE8 643 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Mageb3Q9D2H4 330 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Sptlc2P97363 560 aaKnown RBP17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Usp28Q5I043 1051 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Hook2Q7TMK6 716 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tmem202Q80W35 275 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Clstn3Q99JH7 956 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Polr3eQ9CZT4 710 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Cyp2s1Q9DBX6 501 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Plcb1Q9Z1B3 1216 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Nup210lQ9D2F7 1881 aa17.94■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Casp8ap2Q9WUF3 1962 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Dnah12Q3V0Q1 3086 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Gucy2dA0A0U1RPR8 1117 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Krt36B1AQ75 473 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Krt78E9Q0F0 1068 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tpd52l1O54818 204 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tal1P22091 329 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Dnm2P39054 870 aaKnown RBP17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Gfpt1P47856 697 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ccr5P51682 354 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ano7Q14AT5 859 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Pnma5Q5DTT8 618 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Sema5bQ60519 1093 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 LbpQ61805 481 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Crtc1Q68ED7 630 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tshz2Q68FE9 1030 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Dusp11Q6NXK5 321 aaKnown RBP17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Hdac4Q6NZM9 1076 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Asnsd1Q8BFS9 627 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Ago3Q8CJF9 860 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Q922R1 422 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tmem206Q9D771 350 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tnfsf13bQ9WU72 309 aa17.93■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Gm13941A2AJ38 245 aa17.92■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Atp2b1G5E829 1220 aa17.92■□□□□ 0.46
Tpm1-215ENSMUST00000113705 Tnni3P48787 211 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms