RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 SfnO70456 248 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 MycnP03966 462 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Actn4P57780 912 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Psmc5P62196 406 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cct6aP80317 531 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Rbm46P86049 533 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Taf3Q5HZG4 932 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Hspa4Q61316 841 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Sycp1Q62209 993 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Exoc3Q6KAR6 755 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Hdac10Q6P3E7 666 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Actn1Q7TPR4 892 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cdc23Q8BGZ4 597 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pgm5Q8BZF8 567 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Sash3Q8K352 380 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pcdhgc5Q91XW9 944 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 1700020D05RikQ99PB1 294 aa11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 YwhabQ9CQV8 246 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Rpf2Q9JJ80 306 aaKnown RBP11.78□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pappa2E9PZ87 1789 aa11.77□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 DohhA0A1Y7VJ29 135 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Rsrc2A2RTL5 376 aaKnown RBP11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Serpinb8O08800 374 aaKnown RBP11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Per1O35973 1291 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Dync1i1O88485 628 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 MybP06876 636 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Senp1P59110 640 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Kcna2P63141 499 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Taf1bP97358 586 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Emc10Q3TAS6 258 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 E2f8Q58FA4 860 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Atp13a4Q5XF90 1193 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Cct6bQ61390 531 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Six2Q62232 296 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Cep70Q6IQY5 616 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Asic3Q6X1Y6 530 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Dhx32Q8BZS9 744 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Pnma1Q8C1C8 353 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Rrp1bQ91YK2 724 aaKnown RBP11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ranbp17Q99NF8 1088 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Prl2b1Q9DAZ2 228 aa11.77□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ttll6A4Q9E8 822 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 ErmardE9Q048 622 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Cyth3O08967 399 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 FlgP11088 336 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 GcP21614 476 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Dcaf17Q3TUL7 519 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Snd1Q78PY7 910 aaKnown RBP11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Supt20hQ7TT00 530 aaKnown RBP11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Rusc1Q8BG26 893 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 EtnpplQ8BWU8 499 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Reep2Q8VCD6 254 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Pls3Q99K51 630 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Usp26Q99MX1 835 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Mxra8Q9DBV4 442 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Slc6a16A0A1L1SR47 742 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 SpibO35906 267 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 H2afxP27661 143 aaKnown RBP11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 PklrP53657 574 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Atp11aP98197 1187 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Pdlim7Q3TJD7 457 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Dpcr1Q3TNW5 500 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ccdc42Q5SV66 316 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tll1Q62381 1013 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ccpg1Q640L3 753 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Senp5Q6NXL6 749 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Trpv1Q704Y3 839 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ttc7aQ8BGB2 858 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Vps52Q8C754 723 aaKnown RBP11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Scyl2Q8CFE4 930 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Ttc8Q8VD72 515 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Prpf40aQ9R1C7 953 aaKnown RBP11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Fzd9Q9R216 592 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Trim10Q9WUH5 489 aa11.76□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 1700018F24RikB2RW27 314 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Pus7B7ZNL8 666 aaKnown RBP11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Lrrc4bP0C192 709 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tarbp2P97473 365 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Spdye4aQ5IBH6 268 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tmem130Q6NXM3 419 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Xpnpep1Q6P1B1 623 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Kcnk18Q6VV64 394 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tubb2aQ7TMM9 445 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tmco3Q8BH01 678 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Q8CEZ4 452 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Btbd7Q8CFE5 1130 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Igf2bp3Q9CPN8 579 aaKnown RBP11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Tubb2bQ9CWF2 445 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Cd2bp2Q9CWK3 342 aaKnown RBP11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Cdca7Q9D0M2 382 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Nol7Q9D7Z3 254 aaKnown RBP11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Zcchc17Q9ESX4 241 aaKnown RBP11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Sertad2Q9JJG5 309 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Lamb2Q61292 1799 aa11.75□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 1700016G14RikA0A286YCZ6 238 aa11.74□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Gm8298J3QPI0 401 aa11.74□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Sema4dO09126 861 aa11.74□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Nck2O55033 380 aa11.74□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Stat4P42228 749 aa11.74□□□□□ -0.53
Ttc39a-202ENSMUST00000106618 Gtf2bP62915 316 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms