RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Iqsec1Q8R0S2 961 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Smyd3Q9CWR2 428 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arhgap6O54834 987 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dync1i1O88485 628 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Epha2Q03145 977 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nfe2Q07279 373 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fam107bQ3TGF2 131 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Znf865Q3U3I9 1058 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mfhas1Q3V1N1 1048 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Usp28Q5I043 1051 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Foxd1Q61345 456 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mcm7Q61881 719 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ppp1r13bQ62415 1087 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nudt16Q6P3D0 195 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Smoc2Q8CD91 447 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Bclaf1Q8K019 919 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Plekhh3Q8VCE9 796 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mis18aQ9CZJ6 204 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tfr2Q9JKX3 798 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gyg1Q9R062 333 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Peak1Q69Z38 1735 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 SpibO35906 267 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nr1i2O54915 431 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cyp2f2P33267 491 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Setd4P58467 439 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Grik5Q61626 979 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rexo1Q7TT28 1213 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Grik4Q8BMF5 956 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nemp2Q8CB65 421 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tab2Q99K90 693 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Haus2Q9CQS9 234 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Map3k20Q9ESL4 802 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Add3Q9QYB5 706 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Wdr46Q9Z0H1 622 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cntnap5cQ0V8T7 1305 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Abcb11Q9QY30 1321 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Myh7Q91Z83 1935 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tex13c2A0A0G2JGA3 530 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gm3095E9Q058 166 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Epb41l2O70318 988 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Got1P05201 413 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Aldh2P47738 519 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Kcna2P63141 499 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 HmmrQ00547 794 aaKnown RBP7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dph1Q5NCQ5 438 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gpd2Q64521 727 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Olfr1352Q8VGX5 309 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Med4Q9CQA5 270 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Polr3eQ9CZT4 710 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 MajinQ9D992 256 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tbx18Q9EPZ6 613 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pex11aQ9Z211 246 aa7.58□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cdc25aP48964 514 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tfe3Q64092 572 aaKnown RBP7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nod1Q8BHB0 953 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Haus7Q8BKT8 364 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gga3Q8BMI3 718 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Hic1Q9R1Y5 733 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cul4bA2A432 970 aaKnown RBP7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Map7d1A2AJI0 846 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gm10134F6ZQC6 126 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 UgcgO88693 394 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Surf1P09925 306 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Kif2aP28740 705 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cd22P35329 862 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cd86P42082 309 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pfkfb1P70266 471 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 E2f8Q58FA4 860 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Klra7Q60654 280 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Igbp1Q61249 340 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Epha7Q61772 998 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ercc6lQ8BHK9 1240 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fam126bQ8C729 530 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zfp202Q8C879 641 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Lonp1Q8CGK3 949 aaKnown RBP7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Znf445Q8R2V3 986 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pcdhb12Q91Y07 789 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 F11Q91Y47 624 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zkscan7E9PVW1 718 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dcpp3L7N259 170 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rit2P70425 217 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Taf1bP97358 586 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cdca2Q14B71 982 aaKnown RBP7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rufy4Q3TYX8 563 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Vwa3aQ3UVV9 1148 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Jade2Q6ZQF7 829 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pdlim2Q8R1G6 349 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Igbp1bQ9QZ29 343 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Hebp1Q9R257 190 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Extl3Q9WVL6 918 aa7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Smchd1Q6P5D8 2007 aaKnown RBP7.57□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Slc6a16A0A1L1SR47 742 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Adcy7P51829 1099 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Vwa1Q8R2Z5 415 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Trub2Q91WG3 331 aaKnown RBP7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 1700016D06RikQ9DAA5 166 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rcan1Q9JHG6 198 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Trim12cD3Z3L3 497 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 G430095P16RikE9Q913 147 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 R3hdm1E9Q9Q2 1135 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms