RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Zrsr2Q62377 462 aaKnown RBP20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 KaznQ69ZS8 779 aa20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Anks6Q6GQX6 883 aa20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Baiap3Q80TT2 1134 aa20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Q8BWG4 1187 aa20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ago4Q8CJF8 861 aa20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Luc7lQ9CYI4 371 aaKnown RBP20.06■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Nrxn2E9Q7X7 1710 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ifi207E9Q3L4 978 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Mcm5P49718 733 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 YdjcQ14BV6 310 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Arhgap44Q5SSM3 814 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Acad11Q80XL6 779 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Phf20Q8BLG0 1010 aaKnown RBP20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Scfd1Q8BRF7 639 aaKnown RBP20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Riox2Q8CD15 465 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Lztr1Q9CQ33 837 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Znf354bQ9QXT9 601 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ttc6G3UYY4 1857 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gdap1O88741 358 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Senp1P59110 640 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Traf5P70191 558 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 FtoQ8BGW1 502 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 SucoQ8C341 1250 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Fermt3Q8K1B8 665 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Snx10Q9CWT3 201 aa20.05■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gm45261A0A1B0GSP6 197 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Trappc11B2RXC1 1133 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Lmnb2P21619 596 aaKnown RBP20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Usp4P35123 962 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Tmod1P49813 359 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 RelaQ04207 549 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Acot6Q32Q92 419 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Mcf2lQ64096 1149 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 PolrmtQ8BKF1 1207 aaKnown RBP20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ccdc87Q8CDL9 855 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 PdxkQ8K183 312 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Eif3hQ91WK2 352 aaKnown RBP20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Abcf2Q99LE6 628 aaKnown RBP20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 NynrinQ5DTZ0 1840 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gm38392E9Q2A2 434 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Dnajb6O54946 365 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Cd68P31996 326 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ice2Q3UZ18 988 aaKnown RBP20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gm5935Q497S0 212 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Rsad1Q5SUV1 442 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Acbd5Q5XG73 508 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Rgl1Q60695 768 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Tspyl5Q69ZB3 406 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Rps6ka6Q7TPS0 764 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Acat1Q8QZT1 424 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 CrygnQ8VHL5 183 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Dhx58Q99J87 678 aa20.04■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Tnnc1P19123 161 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Hoxa11P31311 313 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Hspa9P38647 679 aaKnown RBP20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ogfod1Q3U0K8 545 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Git1Q68FF6 770 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Zdhhc24Q6IR37 284 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Nap1l4Q78ZA7 375 aaKnown RBP20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Acsl3Q9CZW4 720 aaKnown RBP20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gm4907B1AXB9 411 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ace3D0G895 737 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Etv6P97360 485 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Q8C6G1 249 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 GgcxQ9QYC7 757 aa20.03■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Osbpl9A2A8Z1 736 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Wdr72D3YYM4 1114 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Naa15Q80UM3 865 aaKnown RBP20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ndufab1Q9CR21 156 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Pabpc6Q9D4E6 643 aaKnown RBP20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Eya4Q9Z191 616 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Usp31E9Q6Y8 1344 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gm28510A0A087WP28 240 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Scgb2b7D3YYY1 112 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 H2afzP0C0S6 128 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Spata18Q0P557 537 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 H2afvQ3THW5 128 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Gpr101Q80T62 511 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 IarsQ8BU30 1262 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Ttc16Q8C1F5 767 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 WdpcpQ8C456 722 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Epn2Q8CHU3 595 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Bud13Q8R149 637 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 TxlnbQ8VBT1 685 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Dph5Q9CWQ0 281 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 4921524L21RikQ9D5T2 438 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 IvdQ9JHI5 424 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Sept3Q9Z1S5 350 aa20.02■□□□□ 0.8
Ccdc3-201ENSMUST00000027988 Zfp213E9QAW0 468 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Csf1rP09581 977 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Mmp14P53690 582 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Fam107bQ3TGF2 131 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Klra5Q60652 266 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Zic5Q7TQ40 622 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Dph6Q9CQ28 267 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 ArpinQ9D0A3 226 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Drap1Q9D6N5 205 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Stk4Q9JI11 487 aa20.01■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Hdgfl1Q2VPR5 283 aa20.01■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms