RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Nck2O55033 380 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Actn4P57780 912 aaKnown RBP22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Erbb2P70424 1256 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Znhit6Q3UFB2 460 aaKnown RBP22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Ccdc42Q5SV66 316 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 AagabQ8R2R3 316 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Ascc2Q91WR3 749 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 1700020D05RikQ99PB1 294 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Cry2Q9R194 592 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Gm4907B1AXB9 411 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 C2cd2E9Q3C1 696 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Pgrmc1O55022 195 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Serpina1aP07758 413 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 P4hbP09103 509 aaKnown RBP22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Serpina1bP22599 413 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Rps6P62754 249 aaKnown RBP22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Mcl1P97287 331 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Serpina1cQ00896 412 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Serpina1dQ00897 413 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Tcp11Q01755 566 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Fgfr4Q03142 799 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Cep70Q6IQY5 616 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Serpinb3bQ9D1Q5 387 aa22.05■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Nfxl1E9Q8I7 918 aaKnown RBP22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Nr1i3O35627 358 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Lrrc4bP0C192 709 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Cd68P31996 326 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Mier3Q3UHF3 551 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Ppp1r7Q3UM45 361 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 GartQ64737 1010 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Zc3h6Q8BYK8 1177 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Skint3A7TZF0 458 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 MybP06876 636 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Lmntd2Q0VET5 664 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Vwa3aQ3UVV9 1148 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Tubb2aQ7TMM9 445 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Map3k11Q80XI6 850 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Tubb2bQ9CWF2 445 aa22.04■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Dhx15O35286 795 aaKnown RBP22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 MyocO70624 490 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Map4k1P70218 827 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 GclcP97494 637 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Emc10Q3TAS6 258 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Dcaf17Q3TUL7 519 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Klra3Q64329 266 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Garem2Q6PAJ3 880 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Znf618Q80YY7 953 aaKnown RBP22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Spdl1Q923A2 608 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 SarnpQ9D1J3 210 aaKnown RBP22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Got1P05201 413 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Klra9Q2TJJ8 266 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Agxt2Q3UEG6 513 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Atg4cQ811C2 458 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Erp44Q9D1Q6 406 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 4931423N10RikQ9D4J9 382 aa22.03■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Klhdc7aA2APT9 773 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Etv6P97360 485 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 4933427I04RikQ3V053 235 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Znf354cQ571J5 560 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 NntQ61941 1086 aaKnown RBP22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 IgflQ6B9Z0 140 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Krt9Q6RHW0 743 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Actn1Q7TPR4 892 aaKnown RBP22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Sun2Q8BJS4 731 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Gpr180Q8BPS4 441 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Zswim4Q8C7B8 1101 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Ccdc73Q8CDM4 1066 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Rpf2Q9JJ80 306 aaKnown RBP22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Cyp2c69E9PXC3 491 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Gm4758L7N258 96 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Ap1b1O35643 943 aaKnown RBP22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Cyp2c40P56657 491 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 ItpripQ3TNL8 555 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Antxr2Q6DFX2 487 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Hpcal4Q8BGZ1 191 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Fam20aQ8CID3 541 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 CbsQ91WT9 561 aa22.02■■□□□ 1.12
Ctdsp1-201ENSMUST00000027367 Irf6P97431 467 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Ogfod1Q3U0K8 545 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Fdxacb1Q3UY23 622 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Sycp1Q62209 993 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 SyncQ9EPM5 470 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Eif3dO70194 548 aaKnown RBP22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Rpl13P47963 211 aaKnown RBP22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Cep126Q0VBV7 1103 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 MaeaQ4VC33 396 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 P4ha1Q60715 534 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Cnot7Q60809 285 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Hdac10Q6P3E7 666 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Slc14a1Q8VHL0 384 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Usp14Q9JMA1 493 aaKnown RBP22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 A0A286YCQ6 122 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Kcng1A2BDX4 514 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Hoxc13P50207 328 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 MmeQ61391 750 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Rassf10Q8BL43 508 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Osbpl1aQ91XL9 950 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Srgap2Q91Z67 1071 aa22.01■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Rgs22G3UYX5 1258 aa22■■□□□ 1.11
Ctdsp1-201ENSMUST00000027367 Eepd1Q3TGW2 569 aa22■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms