RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Rab11fip4Q8BQP8 635 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Olfm5Q8BU90 496 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 PlekQ9JHK5 350 aaKnown RBP13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 AuhQ9JLZ3 314 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Fam71e2L7N480 754 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rag1P15919 1040 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Abcb4P21440 1276 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Cul4aQ3TCH7 759 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tmtc2Q56A06 836 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Lrrcc1Q69ZB0 1026 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ttyh3Q6P5F7 524 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ccdc25Q78PG9 208 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rnaseh2bQ80ZV0 308 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 DcakdQ8BHC4 231 aaKnown RBP13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gcfc2Q8BKT3 769 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 QarsQ8BML9 775 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Cc2d1bQ8BRN9 848 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Nt5c1bQ91YE9 573 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Cuedc2Q9CXX9 284 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Erp44Q9D1Q6 406 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ccdc130Q9D516 385 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Cyth1Q9QX11 398 aa13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Abt1Q9QYL7 269 aaKnown RBP13.38□□□□□ -0.27
Trim23-201ENSMUST00000022225 Olfr310B2RVZ1 332 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rtn2O70622 471 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Myl3P09542 204 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 GmipQ6PGG2 971 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Krt9Q6RHW0 743 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Igdcc3Q8BQC3 813 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Chn1Q91V57 459 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Znf654Q9DAU9 571 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 PodxlQ9R0M4 503 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ccdc78D3Z5T1 437 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Flot1O08917 428 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Bnip3O55003 187 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Atp6v0a2P15920 856 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 CrklP47941 303 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Stmn4P63042 189 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Serping1P97290 504 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 G3bp2P97379 482 aaKnown RBP13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gm156Q58A37 223 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Taok1Q5F2E8 1001 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 HelbQ6NVF4 1074 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gpr139Q80UC8 345 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Chmp2bQ8BJF9 213 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rps6kc1Q8BLK9 1056 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tmem120aQ8C1E7 343 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Grhl1Q921D9 618 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Snx24Q9CRB0 169 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Cabp5Q9JLK3 173 aa13.37□□□□□ -0.27
Trim23-201ENSMUST00000022225 Nedd9O35177 833 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Copb2O55029 905 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Abl1P00520 1123 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Znf367Q0VDT2 340 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tbc1d2bQ3U0J8 965 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Trip13Q3UA06 432 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Skap1Q3UUV5 355 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Pnma5Q5DTT8 618 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rasgrp4Q8BTM9 673 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 AllcQ9JHX6 414 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Nphs1Q9QZS7 1256 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rfwd2Q9R1A8 733 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tnrc6cQ3UHC0 1690 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Krt90E9Q1Z0 538 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Casp14O89094 257 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 PdgfaP20033 211 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Alox15P39654 663 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ccdc92bQ5SUE3 299 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ccdc125Q5U465 500 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Zranb3Q6NZP1 1069 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 MogsQ80UM7 834 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Spc24Q9D083 201 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Dclre1aQ9JIC3 1026 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Pard6bQ9JK83 371 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Nr2e3Q9QXZ7 395 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 E2f6O54917 272 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Nmt2O70311 529 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Sar1aP36536 198 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 ClgnP52194 611 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Creb1Q01147 341 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gbp1Q01514 589 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Plbd2Q3TCN2 594 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Fam71bQ5STT6 665 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Zbtb17Q60821 794 aa13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Ints9Q8K114 658 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Drg2Q9QXB9 364 aaKnown RBP13.36□□□□□ -0.27
Trim23-201ENSMUST00000022225 Usp51B1AY15 661 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gm4340L7N2C4 268 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Pex5O09012 639 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Mcl1P97287 331 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tmem120bQ3TA38 339 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gpsm3Q3U1Z5 159 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Rimbp2Q80U40 1072 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Lrrc41Q8K1C9 807 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Unc5bQ8K1S3 945 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Gimap4Q99JY3 219 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Fgfr1P16092 822 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Siah1aP61092 282 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 Tsg101Q61187 391 aa13.35□□□□□ -0.27
Trim23-201ENSMUST00000022225 LRWD1Q8BUI3 648 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms