RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ppp1r3aQ99MR9 1089 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Snx24Q9CRB0 169 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 DexiQ9WUQ7 95 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rbbp6P97868 1790 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Patl2A2ARM1 529 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Nfxl1E9Q8I7 918 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Kcnu1O54982 1121 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Diaph2O70566 1098 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tagap1P0CAX8 505 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Mybl1P51960 751 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cops2P61202 443 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Fgfr1opQ66JX5 399 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 PawrQ925B0 333 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 CpvlQ9D3S9 478 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cfap53Q9D439 514 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tfap4Q9JIZ5 338 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Pdcd7Q9WTY1 482 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Armc3A2AU72 881 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ube4aE9Q735 1028 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cpsf2O35218 782 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Dab2P98078 766 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Kctd19Q562E2 927 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ddx10Q80Y44 875 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tmco6Q8BQX5 494 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Zcchc8Q9CYA6 709 aaKnown RBP19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rsrc1Q9DBU6 334 aa19.25■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Taf4bG5E8Z2 855 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ccdc160Q3UYG1 323 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Islr2Q5RKR3 745 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Slf2Q6P9P0 1278 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 GmipQ6PGG2 971 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Man2a2Q8BRK9 1152 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Q9DA42 136 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tmem47Q9JJG6 181 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cabp5Q9JLK3 173 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Znf536Q8K083 1302 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Atp2c2A7L9Z8 944 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lrrc32G3XA59 663 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Setd4P58467 439 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rhbdl3P58873 404 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 SkiQ60698 725 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Wasf2Q8BH43 497 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Exd1Q8CDF7 570 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lzts2Q91YU6 671 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Slc12a4Q9JIS8 1085 aa19.24■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Vmn2r79E9Q067 851 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lrrc36Q3V0M2 755 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gbp4Q61107 620 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Hdac10Q6P3E7 666 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lin7aQ8JZS0 233 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Plcb4Q91UZ1 1175 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Sh3bp5lQ99LH9 392 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Orc3Q9JK30 715 aaKnown RBP19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Zmym2Q9CU65 1376 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ano3A2AHL1 981 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rsbn1lD3Z0K6 821 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Epha3P29319 983 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Sept2P42208 361 aaKnown RBP19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 EnahQ03173 802 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Zfp957Q3UT76 567 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Thap3Q8BJ25 218 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lrrc14Q8VC16 493 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gimap4Q99JY3 219 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 TbcbQ9D1E6 244 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 IqcdQ9D3V1 458 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gucy1a3Q9ERL9 691 aa19.23■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ttc38A3KMP2 465 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tada2bD3Z4Z0 420 aaKnown RBP19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cetn3O35648 167 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Mboat4P0C7A3 435 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ets2P15037 468 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gcnt1Q09324 428 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rapgef1Q3UHC1 1224 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cnot7Q60809 285 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ttyh3Q6P5F7 524 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ift74Q8BKE9 600 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Lmbrd1Q8K0B2 537 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cacnb1Q8R3Z5 597 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Q99KU6 348 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Dph5Q9CWQ0 281 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ddah1Q9CWS0 285 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Slc26a4Q9R155 780 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Stk10O55098 966 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 RpsaP14206 295 aaKnown RBP19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Map2k1P31938 393 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Nr2f2P43135 414 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Stmn4P63042 189 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Taok1Q5F2E8 1001 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ppp2r5eQ61151 467 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Esco1Q69Z69 843 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Cyp26b1Q811W2 512 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 NsmfQ99NF2 532 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Krt34Q9D646 392 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Atp6v1g2Q9WTT4 118 aa19.22■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tal1P22091 329 aa19.21■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ugt1a2P70691 533 aa19.21■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Yipf3Q3UDR8 347 aa19.21■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rrp36Q3UFY0 244 aaKnown RBP19.21■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Luc7l3Q5SUF2 432 aaKnown RBP19.21■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Krt87Q6IMF0 495 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 73.7 ms