RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C CIN8P27895 1000 aa2.19□□□□□ -2.06
PRP6YBR055C ERG1P32476 496 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C BUD2P33314 1104 aa2.19□□□□□ -2.06
PRP6YBR055C MIC60P36112 540 aa2.19□□□□□ -2.06
PRP6YBR055C RRP3P38712 501 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C SPT8P38915 602 aa2.19□□□□□ -2.06
PRP6YBR055C LYS12P40495 371 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C CFD1P40558 293 aa2.19□□□□□ -2.06
PRP6YBR055C LOC1P43586 204 aaPredicted RBP2.19□□□□□ -2.06
PRP6YBR055C TOS3P43637 560 aa2.19□□□□□ -2.06
PRP6YBR055C EMC2P47133 292 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C STE24P47154 453 aa2.19□□□□□ -2.06
PRP6YBR055C NUP84P52891 726 aa2.19□□□□□ -2.06
PRP6YBR055C MND1P53102 219 aa2.19□□□□□ -2.06
PRP6YBR055C RET3P53600 189 aa2.19□□□□□ -2.06
PRP6YBR055C SPO19Q03029 223 aa2.19□□□□□ -2.06
PRP6YBR055C RRG8Q06109 277 aa2.19□□□□□ -2.06
PRP6YBR055C SGT1Q08446 395 aa2.19□□□□□ -2.06
PRP6YBR055C GEP3Q08622 556 aa2.19□□□□□ -2.06
PRP6YBR055C APC2Q12440 853 aa2.19□□□□□ -2.06
PRP6YBR055C ARG4P04076 463 aaPredicted RBP2.19□□□□□ -2.06
PRP6YBR055C UNG1P12887 359 aa2.19□□□□□ -2.06
PRP6YBR055C AMD1P15274 810 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C RAD23P32628 398 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C COT1P32798 439 aa2.19□□□□□ -2.06
PRP6YBR055C GWT1P47026 490 aa2.19□□□□□ -2.06
PRP6YBR055C BET4Q00618 327 aa2.19□□□□□ -2.06
PRP6YBR055C BUR2Q05949 395 aa2.19□□□□□ -2.06
PRP6YBR055C VPS74Q06385 345 aa2.19□□□□□ -2.06
PRP6YBR055C DCP1Q12517 231 aaPredicted RBP2.19□□□□□ -2.06
PRP6YBR055C RGS2Q99188 309 aa2.19□□□□□ -2.06
PRP6YBR055C DRS2P39524 1355 aa2.19□□□□□ -2.06
PRP6YBR055C TDH1P00360 332 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C TEF1P02994 458 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C HEM2P05373 342 aa2.19□□□□□ -2.06
PRP6YBR055C ATP1P07251 545 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C RPL18AP0CX49 186 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C RPL18BP0CX50 186 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C RNA1P11745 407 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C SAR1P20606 190 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C ILV6P25605 309 aaKnown RBP2.19□□□□□ -2.06
PRP6YBR055C BZZ1P38822 633 aa2.19□□□□□ -2.06
PRP6YBR055C YHR122WP38829 231 aa2.19□□□□□ -2.06
PRP6YBR055C GCD10P41814 478 aa2.19□□□□□ -2.06
PRP6YBR055C GTO1P48239 356 aa2.19□□□□□ -2.06
PRP6YBR055C POP6P53218 158 aa2.19□□□□□ -2.06
PRP6YBR055C SRL2Q12020 392 aa2.19□□□□□ -2.06
PRP6YBR055C YDR262WQ12331 272 aa2.19□□□□□ -2.06
PRP6YBR055C NUP170P38181 1502 aa2.18□□□□□ -2.06
PRP6YBR055C TRM3Q07527 1436 aa2.18□□□□□ -2.06
PRP6YBR055C CAR2P07991 424 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C RPS16AP0CX51 143 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C RPS16BP0CX52 143 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C CKI1P20485 582 aa2.18□□□□□ -2.06
PRP6YBR055C TIP1P27654 210 aaPredicted RBP2.18□□□□□ -2.06
PRP6YBR055C PEX2P32800 271 aa2.18□□□□□ -2.06
PRP6YBR055C KKQ8P36004 724 aa2.18□□□□□ -2.06
PRP6YBR055C TPO5P36029 618 aa2.18□□□□□ -2.06
PRP6YBR055C YGL242CP53066 181 aa2.18□□□□□ -2.06
PRP6YBR055C YNL050CP53952 270 aa2.18□□□□□ -2.06
PRP6YBR055C ERV41Q04651 352 aa2.18□□□□□ -2.06
PRP6YBR055C TIM18Q08749 192 aa2.18□□□□□ -2.06
PRP6YBR055C MUM3Q08750 479 aa2.18□□□□□ -2.06
PRP6YBR055C NCA2Q12374 616 aa2.18□□□□□ -2.06
PRP6YBR055C CSR2Q12734 1121 aa2.18□□□□□ -2.06
PRP6YBR055C PDR15Q04182 1529 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C SSA3P09435 649 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C YUR1P26725 428 aa2.18□□□□□ -2.06
PRP6YBR055C FET3P38993 636 aa2.18□□□□□ -2.06
PRP6YBR055C DHH1P39517 506 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C YJL070CP40361 888 aa2.18□□□□□ -2.06
PRP6YBR055C GUF1P46943 645 aa2.18□□□□□ -2.06
PRP6YBR055C YDL186WP48568 277 aa2.18□□□□□ -2.06
PRP6YBR055C AVT4P50944 713 aa2.18□□□□□ -2.06
PRP6YBR055C YNR048WP53740 393 aa2.18□□□□□ -2.06
PRP6YBR055C ARK1P53974 638 aa2.18□□□□□ -2.06
PRP6YBR055C ATC1Q04005 294 aa2.18□□□□□ -2.06
PRP6YBR055C YMR034CQ05131 434 aaPredicted RBP2.18□□□□□ -2.06
PRP6YBR055C ARV1Q06541 321 aa2.18□□□□□ -2.06
PRP6YBR055C YAP7Q08182 245 aa2.18□□□□□ -2.06
PRP6YBR055C ATX2Q12067 313 aa2.18□□□□□ -2.06
PRP6YBR055C YOL107WQ12239 342 aa2.18□□□□□ -2.06
PRP6YBR055C PAA1Q12447 191 aaKnown RBP2.18□□□□□ -2.06
PRP6YBR055C YPR1Q12458 312 aa2.18□□□□□ -2.06
PRP6YBR055C SKI3P17883 1432 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C PGK1P00560 416 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C SAM2P19358 384 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C MEK1P24719 497 aaPredicted RBP2.17□□□□□ -2.06
PRP6YBR055C YCL068CP25593 260 aa2.17□□□□□ -2.06
PRP6YBR055C ICL1P28240 557 aaPredicted RBP2.17□□□□□ -2.06
PRP6YBR055C ITR1P30605 584 aa2.17□□□□□ -2.06
PRP6YBR055C EFB1P32471 206 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C SPR1P32603 445 aa2.17□□□□□ -2.06
PRP6YBR055C SIP2P34164 415 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C LCP5P40079 357 aaPredicted RBP2.17□□□□□ -2.06
PRP6YBR055C SEC9P40357 651 aa2.17□□□□□ -2.06
PRP6YBR055C SIM1P40472 476 aa2.17□□□□□ -2.06
PRP6YBR055C YIR016WP40572 265 aa2.17□□□□□ -2.06
PRP6YBR055C LAM5P43560 674 aa2.17□□□□□ -2.06
PRP6YBR055C SPR6Q01684 191 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms