RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 DNAJC18Q9H819 358 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 CYP3A7-CYP3A51PA0A087WV96 503 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 SHTN1A0MZ66 631 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 CEP104O60308 925 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 GYS1P13807 737 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 CYP3A7P24462 503 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 USP11P51784 963 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 EXOC3L4Q17RC7 722 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
PHGDH-233ENST00000642021 ALKBH5Q6P6C2 394 aaKnown RBP15.14■□□□□ 0.01
PHGDH-233ENST00000642021 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 SCFD2Q8WU76 684 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 KAT2BQ92831 832 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 PITPNM2Q9BZ72 1349 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 BTAF1O14981 1849 aa15.14■□□□□ 0.01
PHGDH-233ENST00000642021 NDUFAB1O14561 156 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 DCAF17Q5H9S7 520 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 KDM7AQ6ZMT4 941 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 EPM2AIP1Q7L775 607 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CD302Q8IX05 232 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CRYGNQ8WXF5 182 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 NEUROG2Q9H2A3 272 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 PLCB1Q9NQ66 1216 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 AFPP02771 609 aaKnown RBP15.13■□□□□ 0.01
PHGDH-233ENST00000642021 ARHGAP4P98171 946 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 FAM43BQ6ZT52 329 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-233ENST00000642021 FRMD5Q7Z6J6 570 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 METTL13Q8N6R0 699 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 OR2W6PQ8NHA6 318 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 TAF4BQ92750 862 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 LENG9Q96B70 501 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 SIX2Q9NPC8 291 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 PLAAQ9Y263 795 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 EP400Q96L91 3159 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 FAM170AA1A519 330 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 FAM86B1E9PN63 330 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CLIC2O15247 247 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CPP00450 1065 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 FAM86B2P0C5J1 330 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 LSP1P33241 339 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 TNNC1P63316 161 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CYP4A11Q02928 519 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 EPHA7Q15375 998 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 SLC30A10Q6XR72 485 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 CYP2W1Q8TAV3 490 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 ISCUQ9H1K1 167 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-233ENST00000642021 EFCC1Q9HA90 598 aa15.13■□□□□ 0.01
PHGDH-233ENST00000642021 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 ITGA4P13612 1032 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 EEF2P13639 858 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 NR1D1P20393 614 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 HSPA9P38646 679 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 SEC24CP53992 1094 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 CACNB3P54284 484 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 HLTFQ14527 1009 aaKnown RBP eCLIP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 UAP1Q16222 522 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 TCERG1LQ5VWI1 586 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 TPCN2Q8NHX9 752 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 PCDHAC2Q9Y5I4 1007 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 SART1O43290 800 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
PHGDH-233ENST00000642021 FLT3P36888 993 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 EMC10Q5UCC4 262 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 SLC35C1Q96A29 364 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 ATP6V1G3Q96LB4 118 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 NENFQ9UMX5 172 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 DNM3Q9UQ16 869 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
PHGDH-233ENST00000642021 ASTN1O14525 1302 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 DDX3XO00571 662 aaKnown RBP eCLIP15.11■□□□□ 0.017e-18■■■□□ 16.8
PHGDH-233ENST00000642021 RPA1P27694 616 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 HSD17B3P37058 310 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 MAATS1Q7Z4T9 603 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 SLFN12Q8IYM2 578 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 ACTRT1Q8TDG2 376 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 RUSC1Q9BVN2 902 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 H0YGN5 161 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-233ENST00000642021 PRKCIP41743 596 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 ITGB3BPQ13352 177 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-233ENST00000642021 C10orf76Q5T2E6 689 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 NAP1L4Q99733 375 aaKnown RBP15.11■□□□□ 0.01
PHGDH-233ENST00000642021 BHMT2Q9H2M3 363 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 PCDHB13Q9Y5F0 798 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
PHGDH-233ENST00000642021 TMCO5BA8MYB1 307 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms