RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 UTP14CQ5TAP6 766 aaKnown RBP19.52■□□□□ 0.71
PHGDH-232ENST00000641947 PLA2G4FQ68DD2 849 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 GPR142Q7Z601 462 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 SCFD1Q8WVM8 642 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 TRIM47Q96LD4 638 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 ZIC5Q96T25 663 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.52■□□□□ 0.71
PHGDH-232ENST00000641947 GABBR1Q9UBS5 961 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 TCEAL9Q9UHQ7 104 aa19.52■□□□□ 0.71
PHGDH-232ENST00000641947 MGAMO43451 1857 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 ZSWIM8A7E2V4 1837 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 ARHGEF35A5YM69 484 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 BACH1O14867 736 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
PHGDH-232ENST00000641947 LY6KQ17RY6 165 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 PADI6Q6TGC4 694 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 ANO5Q75V66 913 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
PHGDH-232ENST00000641947 DRC7Q8IY82 874 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 DAW1Q8N136 415 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 EEF2KMTQ96G04 330 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 ZNF830Q96NB3 372 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-232ENST00000641947 IGSF9BQ9UPX0 1349 aa19.51■□□□□ 0.71
PHGDH-232ENST00000641947 SUPT20HL2P0C7V6 817 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 PPP1R2P41236 205 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 GRB14Q14449 540 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-232ENST00000641947 ZCWPW2Q504Y3 356 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 HS1BP3Q53T59 392 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 SWSAP1Q6NVH7 229 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 EPM2AIP1Q7L775 607 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-232ENST00000641947 MYOCDQ8IZQ8 938 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 FIZ1Q96SL8 496 aa19.5■□□□□ 0.71
PHGDH-232ENST00000641947 A0A1B0GTH6 734 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 NKRFO15226 690 aaKnown RBP eCLIP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 ATG7O95352 703 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 PSAPP07602 524 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 MYBP10242 640 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 PTGS1P23219 599 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 GUCY2CP25092 1073 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 HOXD13P35453 343 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 ZNF131P52739 623 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 NPEPPSP55786 919 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 KRT31Q15323 416 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 ARMCX2Q7L311 632 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 IFNL1Q8IU54 200 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 ABRAQ8N0Z2 381 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 SRRTQ9BXP5 876 aaKnown RBP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 KCNF1Q9H3M0 494 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 PDGFCQ9NRA1 345 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 DDX41Q9UJV9 622 aaKnown RBP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 GSTTP1A0A1W2PQM5 241 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 KCNJ18B7U540 433 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 TBCAO75347 108 aaKnown RBP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 KCNJ12Q14500 433 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 TCP11X2Q5H9J9 407 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
PHGDH-232ENST00000641947 LIMA1Q9UHB6 759 aaKnown RBP19.49■□□□□ 0.71
PHGDH-232ENST00000641947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■□ 21.2
PHGDH-232ENST00000641947 CENPFP49454 3210 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 BICDL2A1A5D9 508 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 B4DLN1 442 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 TEX33O43247 280 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 STRNO43815 780 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 USO1O60763 962 aaKnown RBP19.48■□□□□ 0.71
PHGDH-232ENST00000641947 HIP1RO75146 1068 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 ECM2O94769 699 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-232ENST00000641947 GGPS1O95749 300 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 ATP4AP20648 1035 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 ARID5BQ14865 1188 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 CCDC62Q6P9F0 684 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 TMC6Q7Z403 805 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 NELFCDQ8IXH7 590 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 CSGALNACT2Q8N6G5 542 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 PCYT2Q99447 389 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 THAP9Q9H5L6 903 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 ZCCHC17Q9NP64 241 aaKnown RBP19.48■□□□□ 0.71
PHGDH-232ENST00000641947 ABT1Q9ULW3 272 aaKnown RBP19.48■□□□□ 0.71
PHGDH-232ENST00000641947 COL4A3BPQ9Y5P4 624 aa19.48■□□□□ 0.71
PHGDH-232ENST00000641947 LOC102724159A0A0B4J2E5 919 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 CBFA2T2O43439 604 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 FAM13AO94988 1023 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 TGFB3P10600 412 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 NR1I3Q14994 352 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 PWP2Q15269 919 aaKnown RBP19.47■□□□□ 0.71
PHGDH-232ENST00000641947 MIS18BP1Q6P0N0 1132 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 MAEAQ7L5Y9 396 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 PLEKHH3Q7Z736 793 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 COPS5Q92905 334 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 MPHOSPH6Q99547 160 aaKnown RBP19.47■□□□□ 0.71
PHGDH-232ENST00000641947 KATNBL1Q9H079 304 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 OLFML3Q9NRN5 406 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 ODF2LQ9ULJ1 636 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 IVNS1ABPQ9Y6Y0 642 aa19.47■□□□□ 0.71
PHGDH-232ENST00000641947 IGKV6D-21A0A0A0MT36 114 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms