RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FAM86B1E9PN63 330 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 NR3C2P08235 984 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 FAM86B2P0C5J1 330 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 CIITAP33076 1130 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 CPT1AP50416 773 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-228ENST00000641847 SLC39A14Q15043 492 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 Q4G0T1 1027 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 PRR16Q569H4 304 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 FAM47CQ5HY64 1035 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 XRRA1Q6P2D8 792 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 POTEBQ6S5H4 581 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 HFE2Q6ZVN8 426 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 TMEM87AQ8NBN3 555 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 LINC00301Q8NCQ3 95 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-228ENST00000641847 MBOAT7Q96N66 472 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 IWS1Q96ST2 819 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 MPHOSPH6Q99547 160 aaKnown RBP10.6□□□□□ -0.71
PHGDH-228ENST00000641847 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
PHGDH-228ENST00000641847 RAD9AQ99638 391 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 IRF2BPLQ9H1B7 796 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 MTUS1Q9ULD2 1270 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
PHGDH-228ENST00000641847 DDX49Q9Y6V7 483 aaKnown RBP10.6□□□□□ -0.71
PHGDH-228ENST00000641847 IGLV3-22A0A075B6J6 115 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-228ENST00000641847 B4DLN1 442 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 LAD1O00515 517 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 SPTLC2O15270 562 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 PPP6R2O75170 966 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 IQCF3P0C7M6 154 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 SMPD1P17405 629 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 EDNRBP24530 442 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
PHGDH-228ENST00000641847 ATP2C1P98194 919 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-228ENST00000641847 PDE4DQ08499 809 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 PTGDRQ13258 359 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 CALCRLQ16602 461 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 EP400NLQ6ZTU2 488 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 LENG9Q96B70 501 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 MXRA8Q9BRK3 442 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 MTG1Q9BT17 334 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-228ENST00000641847 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 TMEM60Q9H2L4 133 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 SUGCTQ9HAC7 445 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 RCOR1Q9UKL0 485 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 UBIAD1Q9Y5Z9 338 aa10.59□□□□□ -0.71
PHGDH-228ENST00000641847 MORC2Q9Y6X9 1032 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-228ENST00000641847 MCM3APO60318 1980 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 MARCH6O60337 910 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 KPNA6O60684 536 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 EFCAB14O75071 495 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 STAM2O75886 525 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ARHGEF15O94989 841 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 PARNO95453 639 aaKnown RBP10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ITGB5P18084 799 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 MARCKSP29966 332 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-228ENST00000641847 MCM4P33991 863 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ME1P48163 572 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ERVK-21P61565 698 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
PHGDH-228ENST00000641847 STXBP2Q15833 593 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 TIGD5Q53EQ6 642 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 NFRKBQ6P4R8 1299 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 NLRX1Q86UT6 975 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 PLA2G4DQ86XP0 818 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ADHFE1Q8IWW8 467 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 SUGP1Q8IWZ8 645 aaKnown RBP10.58□□□□□ -0.72
PHGDH-228ENST00000641847 C4orf32Q8N8J7 132 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 VTA1Q9NP79 307 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 JADE2Q9NQC1 790 aa10.58□□□□□ -0.72
PHGDH-228ENST00000641847 FBXO2Q9UK22 296 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-228ENST00000641847 KIAA1217Q5T5P2 1943 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 LCHNA4D1U4 455 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 H3BQ06 376 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MEIS1O00470 390 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MSH4O15457 936 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 NCK2O43639 380 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 GFRA3O60609 400 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 PRPF40AO75400 957 aaKnown RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MYL3P08590 195 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 ARP10275 920 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 PRPHP41219 470 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 WDR5P61964 334 aaKnown RBP10.57□□□□□ -0.72
PHGDH-228ENST00000641847 GRIN1Q05586 938 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 ZP2Q05996 745 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 MTMR1Q13613 665 aa10.57□□□□□ -0.72
PHGDH-228ENST00000641847 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms