RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 FAM153CQ494X1 144 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 Q4G0T1 1027 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 HHIPL2Q6UWX4 724 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 TADA2BQ86TJ2 420 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 LRRC57Q8N9N7 239 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 PACSIN1Q9BY11 444 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 ISCUQ9H1K1 167 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 TAF1DQ9H5J8 278 aaPredicted RBP11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
SAMMSON-218ENST00000641601 GTPBP10A4D1E9 387 aaKnown RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ZSCAN5CA6NGD5 496 aaPredicted RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 HMGB1P1B2RPK0 211 aaPredicted RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 FLOT1O75955 427 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 GFPT2O94808 682 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 GYS1P13807 737 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 RPL13P26373 211 aaKnown RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 PON1P27169 355 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 NPEPPSP55786 919 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ARID5AQ03989 594 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 EPHA7Q15375 998 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 EXOC3L4Q17RC7 722 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 B4GALNT4Q76KP1 1039 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ZNF571Q7Z3V5 609 aaPredicted RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 SLFN11Q7Z7L1 901 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 LMBR1Q8WVP7 490 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 IFT81Q8WYA0 676 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 FAM20AQ96MK3 541 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 TYW1Q9NV66 732 aaKnown RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 NYAP2Q9P242 653 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 NAGPAQ9UK23 515 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 DNM3Q9UQ16 869 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 PCDHA1Q9Y5I3 950 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 CCDC188H7C350 402 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 MEIS2O14770 477 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 RAD51CO43502 376 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 KRT14P02533 472 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 SLC9A1P19634 815 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 HOXD13P35453 343 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 NOP2P46087 812 aaKnown RBP11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 CASP5P51878 434 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 JAM2P57087 298 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 VPS36Q86VN1 386 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 CERS5Q8N5B7 392 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 ATP6V1G3Q96LB4 118 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 REEP2Q9BRK0 252 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 KANSL2Q9H9L4 492 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
SAMMSON-218ENST00000641601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 ESYT3A0FGR9 886 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 PGRMC1O00264 195 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 MPHOSPH10O00566 681 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 KCNK3O14649 394 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 ACTN1P12814 892 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 STAT3P40763 770 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 MMP14P50281 582 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 NFIL3Q16649 462 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 CDC42EP5Q6NZY7 148 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 ALKBH5Q6P6C2 394 aaKnown RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 SYCE1Q8N0S2 351 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 RASGEF1CQ8N431 466 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 TPCN2Q8NHX9 752 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 CAMKK2Q96RR4 588 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 SIX2Q9NPC8 291 aa11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 SUCLA2Q9P2R7 463 aaPredicted RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
SAMMSON-218ENST00000641601 PPEF1O14829 653 aaPredicted RBP11.07□□□□□ -0.64
SAMMSON-218ENST00000641601 NR3C1P04150 777 aa11.07□□□□□ -0.64
SAMMSON-218ENST00000641601 FERP16591 822 aa11.07□□□□□ -0.64
SAMMSON-218ENST00000641601 GAP43P17677 238 aa11.07□□□□□ -0.64
SAMMSON-218ENST00000641601 NR1D1P20393 614 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms