RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 EEPD1Q7L9B9 569 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 TMC6Q7Z403 805 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 FILIP1Q7Z7B0 1213 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 MYOCDQ8IZQ8 938 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 C17orf53Q8N3J3 647 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 PDCL2Q8N4E4 241 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 KCTD17Q8N5Z5 321 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 FAM133AQ8N9E0 248 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 KIAA0895Q8NCT3 520 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 SHCBP1Q8NEM2 672 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 UBE2Q2Q8WVN8 375 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 MED15Q96RN5 788 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 TSG101Q99816 390 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 RUSC1Q9BVN2 902 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 PORCNQ9H237 461 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 TMX1Q9H3N1 280 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 POLD4Q9HCU8 107 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 JPH1Q9HDC5 661 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-219ENST00000641513 SLC9A2Q9UBY0 812 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 PCDHA10Q9Y5I2 948 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 IVNS1ABPQ9Y6Y0 642 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 KAT6AQ92794 2004 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 ASTN1O14525 1302 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 NFASCO94856 1347 aa9.81□□□□□ -0.84
PHGDH-219ENST00000641513 GOLGA6L9A6NEM1 432 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 SPATA31C2B4DYI2 1134 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 KCNJ18B7U540 433 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 PES1O00541 588 aaKnown RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 BACH1O14867 736 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 RGS20O76081 388 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 KIF20AO95235 890 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 CCNE2O96020 404 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 PSAPP07602 524 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 KCNA2P16389 499 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 ZNF18P17022 549 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 PSMC5P62195 406 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 SPAG1Q07617 926 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 KCNJ12Q14500 433 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 ANKRD40Q6AI12 368 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 RGMBQ6NW40 437 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 MIS18BP1Q6P0N0 1132 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 CYFIP1Q7L576 1253 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 MAEAQ7L5Y9 396 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 SFR1Q86XK3 245 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 RASAL3Q86YV0 1011 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 NELFCDQ8IXH7 590 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 SMAP1Q8IYB5 467 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 MYCT1Q8N699 235 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 CSGALNACT2Q8N6G5 542 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 RDM1Q8NG50 284 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 NOC3LQ8WTT2 800 aaKnown RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 SRRTQ9BXP5 876 aaKnown RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 WRAP73Q9P2S5 460 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 ABT1Q9ULW3 272 aaKnown RBP9.8□□□□□ -0.84
PHGDH-219ENST00000641513 COL4A3BPQ9Y5P4 624 aa9.8□□□□□ -0.84
PHGDH-219ENST00000641513 EVPLQ92817 2033 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 MANSC4A6NHS7 340 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 ASB14A6NK59 587 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 RSPH10B2B2RC85 870 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 DKC1O60832 514 aaKnown RBP eCLIP9.79□□□□□ -0.841e-16■■■■■ 39.7
PHGDH-219ENST00000641513 RSPH10BP0C881 870 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 GAP43P17677 238 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 YWHABP31946 246 aaKnown RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 PMS1P54277 932 aaKnown RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 ACTR2P61160 394 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 GRM1Q13255 1194 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 UGCGQ16739 394 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 COBLL1Q53SF7 1204 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 XKR9Q5GH70 373 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 CDKAL1Q5VV42 579 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 SWSAP1Q6NVH7 229 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 ARMCX5Q6P1M9 558 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 C1orf186Q6ZWK4 172 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 FAM114A1Q8IWE2 563 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 GUF1Q8N442 669 aaKnown RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 KIF18AQ8NI77 898 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 C16orf45Q96MC5 204 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 CTAGE1Q96RT6 745 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 PTPN18Q99952 460 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 SENP7Q9BQF6 1050 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 VPS16Q9H269 839 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 THAP9Q9H5L6 903 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 BCAS3Q9H6U6 928 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 MRPL44Q9H9J2 332 aaKnown RBP9.79□□□□□ -0.84
PHGDH-219ENST00000641513 TAB2Q9NYJ8 693 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 PHLPP2Q6ZVD8 1323 aa9.79□□□□□ -0.84
PHGDH-219ENST00000641513 FRMD3A2A2Y4 597 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms