RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 AMACRQ9UHK6 382 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 BZW2Q9Y6E2 419 aaKnown RBP14.95□□□□□ -0.02
PAX6-280ENST00000640872 CDK5RAP2Q96SN8 1893 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 NHSQ6T4R5 1651 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 BTAF1O14981 1849 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 F8VZ95 297 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 BACH1O14867 736 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 SCTRP47872 440 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 NOVP48745 357 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 MMP14P50281 582 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 MAGOHP61326 146 aaKnown RBP14.95□□□□□ -0.02
PAX6-280ENST00000640872 PTPROQ16827 1216 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 ODF2Q5BJF6 829 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 DNAAF5Q86Y56 855 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 P3H4Q92791 437 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 MAGOHBQ96A72 148 aaKnown RBP14.95□□□□□ -0.02
PAX6-280ENST00000640872 COA7Q96BR5 231 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 LRRC4CQ9HCJ2 640 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 DONSONQ9NYP3 566 aa14.95□□□□□ -0.02
PAX6-280ENST00000640872 MYH7BA7E2Y1 1941 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 USP17L5A8MUK1 530 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 BAG3O95817 575 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 DRD4P21917 467 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 TM4SF1P30408 202 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 PRKCIP41743 596 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 EPS15P42566 896 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 XRCC4Q13426 336 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 ADAM9Q13443 819 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 GRIK5Q16478 980 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 EDRF1Q3B7T1 1238 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 ALKBH5Q6P6C2 394 aaKnown RBP14.94□□□□□ -0.02
PAX6-280ENST00000640872 CCDC50Q8IVM0 306 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 CCDC65Q8IXS2 484 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 CCT6BQ92526 530 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 TLCD1Q96CP7 247 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 NLRP3Q96P20 1036 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
PAX6-280ENST00000640872 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
PAX6-280ENST00000640872 RTCBQ9Y3I0 505 aaKnown RBP14.94□□□□□ -0.02
PAX6-280ENST00000640872 SBF2Q86WG5 1849 aa14.94□□□□□ -0.02
PAX6-280ENST00000640872 TTI1O43156 1089 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 PDHBP11177 359 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 UCHL3P15374 230 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 SLC9A1P19634 815 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 ELF1P32519 619 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 POU5F1Q01860 360 aaKnown RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 GKAP1Q5VSY0 366 aaPredicted RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 TAX1BP1Q86VP1 789 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 GIMAP7Q8NHV1 300 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 PSMD1Q99460 953 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 TXLNGYQ9BZA5 131 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 EMILIN3Q9NT22 766 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 TPX2Q9ULW0 747 aaKnown RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 GHRP10912 638 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 GSTO1P78417 241 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 KCTD19Q17RG1 926 aaPredicted RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 KRT71Q3SY84 523 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 PEX26Q7Z412 305 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
PAX6-280ENST00000640872 WDR66Q8TBY9 1149 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 FAM114A2Q9NRY5 505 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 HDAC9Q9UKV0 1011 aa14.93□□□□□ -0.02
PAX6-280ENST00000640872 NPHP3-ACAD11A0A0J9YXS1 232 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 PHF20L1A8MW92 1017 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 TMCO5BA8MYB1 307 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 E9PMD0 336 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 CETN3O15182 167 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 PPFIA2O75334 1257 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 DNAJC8O75937 253 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 SSBP05455 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
PAX6-280ENST00000640872 ANXA13P27216 316 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 TNNI2P48788 182 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 DHX9Q08211 1270 aaKnown RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 SPDYCQ5MJ68 293 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 CCDC26Q8TAB7 109 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 GJA10Q969M2 543 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 NT5C3AQ9H0P0 336 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 KDM4CQ9H3R0 1056 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 CNOT10Q9H9A5 744 aaKnown RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 DDX25Q9UHL0 483 aaKnown RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 FRMPD2Q68DX3 1309 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 FRMD3A2A2Y4 597 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 FLOT1O75955 427 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 PLA2G4BP0C869 781 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 HERC4Q5GLZ8 1057 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 ERMARDQ5T6L9 678 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 TPTE2Q6XPS3 522 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 ATP8B4Q8TF62 1192 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms